Transcript Information: R_Transcript_365104.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32947582950756
Replicate 20.30319567388156
Replicate 30.33078321438487
Condition 2: 8 Hour
Replicate 10.26518987307486
Replicate 20.64580164162269
Replicate 30.52423424174403
Condition 3: 24 Hour
Replicate 10.082880170497127
Replicate 20.79621873251182
Replicate 30.2370509532877


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_365104.p1 GENE.R_Transcript_365104~~R_Transcript_365104.p1 ORF type:complete len:277 (+),score=22.57,Plant_tran|PF04827.10|8.8e+02,Plant_tran|PF04827.10|2.9e-33 R_Transcript_365104:715-1545(+)
ATGTCTTCGTCTTCAACCTCCACAATCTCCTCTTGCTCAACTGAAAACAATTTTGATGAGTTCATGAATTCATTCGTAGAGTTCAACCAATCAATAGACCAAAGGCGACAAGCATATGAGACTATTCAAAATCAGATTATTTCCTGTATTGCTCCACTAATATCTCTGACAATCGAAAGGCCTATGCAACGTAGAAGACATATTTACAGAGACCGTGAAGATGCTCATCATCACTTAATTAGTGACTATTTTGTCCCAAACGCAAGATACGAAGACCATTTCCGCCGAACATTCCGTATGAACAAACATGTATTTCTTCGTATCATGAGGGCTCTAAGTGAAAGTGATTTATTTTTTAACCAACGGGCTGATGCAACTGGCCGACTTGGGCTGTCCATTGAACAAAAGTACACTGCAGCCGTAAGAATGCTTGCATATGGGGTAGCCGCTGACATGGTGGATGAGTGTTTGAAAGTTGCACAAACTACTGCTAAACAATGTCTTCTCAAATTTGTTGAGGGTGTCATTAACCAATTTGGTGATGAATATCTACGAAGGCCAAATGATAGTGATATGGAAAGGTTTCTTAAAGAAGGAAGACAACGTGGATTTCGAGGGATGATGGGTATCATCGATTACATGCATTGGGAGTTGAAAAATTGTCCTCGCGGTTGGAGGGGTCAATTCCAAGGTAGAGAAAAGAAGGCGACGCTAATCCTTGAAACTATTGGCTCGCGTAACCTTTGGATTTGGCATGCTTTCTTCGGAATTCCAGGTTCTTGTAATGACATCAATGTCCTCGATTGTTCCCTGTGTTCGATGACATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_365104.p1 GENE.R_Transcript_365104~~R_Transcript_365104.p1 ORF type:complete len:277 (+),score=22.57,Plant_tran|PF04827.10|8.8e+02,Plant_tran|PF04827.10|2.9e-33 R_Transcript_365104:715-1545(+)
MSSSSTSTISSCSTENNFDEFMNSFVEFNQSIDQRRQAYETIQNQIISCIAPLISLTIERPMQRRRHIYRDREDAHHHLISDYFVPNARYEDHFRRTFRMNKHVFLRIMRALSESDLFFNQRADATGRLGLSIEQKYTAAVRMLAYGVAADMVDECLKVAQTTAKQCLLKFVEGVINQFGDEYLRRPNDSDMERFLKEGRQRGFRGMMGIIDYMHWELKNCPRGWRGQFQGREKKATLILETIGSRNLWIWHAFFGIPGSCNDINVLDCSLCSMTY*

Click here to download the sequence:
Link to NCBI Protein BLAST