Transcript Information: R_Transcript_365559.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value9E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11700615996615
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15696067273875
Replicate 20.86003391696868
Replicate 30.34906943500744
Condition 3: 24 Hour
Replicate 10.36791357736705
Replicate 20.21206979702478
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_365559.p1 GENE.R_Transcript_365559~~R_Transcript_365559.p1 ORF type:complete len:312 (+),score=31.08,LRR_8|PF13855.2|0.00012,LRR_8|PF13855.2|0.023,LRR_8|PF13855.2|0.041,LRR_8|PF13855.2|7.2e-06,LRR_4|PF12799.3|2,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|0.9,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.2e+04 R_Transcript_365559:118-1053(+)
ATGGCTCTTCATGCTATTTGTTTGTCATCCTTGATAATATTACTTTTGCATGTCGACCTTTTCCGAGCAACTAGTGATAAGCAATCTCAGTATTTTAACCTCATGAAAAGCTCCTTCTCAGGTGACGCCTTATCTGACTGGCGAATCAAGGGTGAGGATTCTTACTGTAACTACACTGGGATCATCTGCAATCCTCGAGGCCAAGTCACAAAGATCGACATTTCAGGATGGTCACTTAAAGGCTCGTTTCCACCAGACGTGTGTTCCTACTTACCAAAGTTGCGTGCACTTGATATCAGTAGCAACTTCATTCACGGCAGTTTTCCTGTCAGCATCACCAATTGTTCGCTCTTGGAAGAACTCGACATGAGCAATTTATATCTCAGAGGGAAGCTGCCAGATTTCTCTCCAATGAAATCCCTTAGGGTGCTGCAAGTATCGTCTAATCAATTCACAGGAGAATTTCCTATGTCGATTACCAACCTCACCAATCTCGAAGTGGTAAACTTCAATGAGAATGAGAAGCTGAACTATTGGGAACTCCCCGAGAACATCACACAGTTAACAAGGCTCAAAATATTGATCCTGTCAACCACCTTTCTTCGAGGATGTATTCCTCCGTCAATAGGAAATATGACATCCCTCGTTGATCTTGAGCTCAGCGGGAACTACCTTACAGGCCATATTCCGCCAGAGCTAGGAAAATTGAAGAACCTGAAGTCCCTAATGCTTTACTATAATATGTTGATTACTGGAAGCATTCCAGAAGAGCTGGGAAATCTGACGGAGCTTACAGAATTGGACATGTCAGTGAAACTACTGACAGGTAGAATTACTGACATGGTAGAATTCCAGAGTCAATTGCCCGTCTTCCCAAACTCCAAGTCTTACAGCTTTTCAACAACAGCCTTAGTGGAGAGATTCCAGCTTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_365559.p1 GENE.R_Transcript_365559~~R_Transcript_365559.p1 ORF type:complete len:312 (+),score=31.08,LRR_8|PF13855.2|0.00012,LRR_8|PF13855.2|0.023,LRR_8|PF13855.2|0.041,LRR_8|PF13855.2|7.2e-06,LRR_4|PF12799.3|2,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|0.9,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.2e+04 R_Transcript_365559:118-1053(+)
MALHAICLSSLIILLLHVDLFRATSDKQSQYFNLMKSSFSGDALSDWRIKGEDSYCNYTGIICNPRGQVTKIDISGWSLKGSFPPDVCSYLPKLRALDISSNFIHGSFPVSITNCSLLEELDMSNLYLRGKLPDFSPMKSLRVLQVSSNQFTGEFPMSITNLTNLEVVNFNENEKLNYWELPENITQLTRLKILILSTTFLRGCIPPSIGNMTSLVDLELSGNYLTGHIPPELGKLKNLKSLMLYYNMLITGSIPEELGNLTELTELDMSVKLLTGRITDMVEFQSQLPVFPNSKSYSFSTTALVERFQLL*

Click here to download the sequence:
Link to NCBI Protein BLAST