Transcript Information: R_Transcript_365561.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value9E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62226003254723
Replicate 20.37493393600532
Replicate 30.59498019730266
Condition 2: 8 Hour
Replicate 11.311742765031
Replicate 21.597205845799
Replicate 32.4162858293372
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 20.53705987558224
Replicate 30.67510777443352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_365561.p1 GENE.R_Transcript_365561~~R_Transcript_365561.p1 ORF type:complete len:616 (+),score=79.27,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.022,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|1.2e+03,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|12,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_4|PF12799.3|7.1,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.039,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|35,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|4.8,LRR_4|PF12799.3|2.6,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|18,LRR_1|PF00560.29|9.3e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|3.8e+02 R_Transcript_365561:118-1965(+)
ATGGCTCTTCATGCTATTTGTTTGTCATCCTTGATAATATTACTTTTGCATGTCGACCTTTTCCGAGCAACTAGTGATAAGCAATCTCAGTATTTTAACCTCATGAAAAGCTCCTTCTCAGGTGACGCCTTATCTGACTGGCGAATCAAGGGTGAGGATTCTTACTGTAACTACACTGGGATCATCTGCAATCCTCGAGGCCAAGTCACAAAGATCGACATTTCAGGATGGTCACTTAAAGGCTCGTTTCCACCAGACGTGTGTTCCTACTTACCAAAGTTGCGTGCACTTGATATCAGTAGCAACTTCATTCACGGCAGTTTTCCTGTCAGCATCACCAATTGTTCGCTCTTGGAAGAACTCGACATGAGCAATTTATATCTCAGAGGGAAGCTGCCAGATTTCTCTCCAATGAAATCCCTTAGGGTGCTGCAAGTATCGTCTAATCAATTCACAGGAGAATTTCCTATGTCGATTACCAACCTCACCAATCTCGAAGTGGTAAACTTCAATGAGAATGAGAAGCTGAACTATTGGGAACTCCCCGAGAACATCACACGGTTAACAAGGCTCAAAACATTGATCCTGTCAACCACTTTTCTTCGAGGACGTATTCTTCCATCAATAGGAAATATGACATCCCTCGTTGATCTTGAGCTCAGCGGGAACTACCTTACAGGCCATATTCCGCCAGAGCTAGGAAAATTGAAGAACCTGAAGTCCCTAATGCTTTACTATAATATGTTGATTACTGGTAGTATTCCAGAAGAGCTGGGAAATCTAACAGAGCTTACAGAATTGGACATGTCAGTGAACCTACTGACAGGTAGAATTCCAGAGTCAATTGCCCGTCTTCCCAAACTCCAAGTCTTACAGCTTTTCAACAACAGCCTTAGTGGAGAGATTCCAGCTTCTCTAGGACAATCCAGTACATTGAGCTACTTTTCTGTCTATGAGAACTTTCTGACAGGTGAAGTTCCTGAAAATCTTGGGAATTCATCAATAATGATGGAAGTAGATATGTCAGAGAATTACTTGTCTGGTAAACTACCACCAAATATCTGCAGAGGGGGTAAACTTGAGCTCTTTCTTGCTCTTTCCAATAGGTTTACTGGTGAGATACCTGAAAGCTACACGACGTGCACATCACTGATACGTTTTCGTGTCAGCAAGAATCAATTGGTGGGATTGGTTCCTCAAGGAATTTTCGGTCTCCCTCGAGTGAATGTCATTGATTTGTCTTTCAATCAATTGACCAGTCCAATACCTATAGAAATCAAAAATGCTAAAAACATGTCAGAATTTATGGCAGCACACAACAAACTATCTGGAGTTCTGCCACCAGAGATATCTGAAGCTCGCAAATTAGTGAAAATTGATCTGCGCAACAATCTCTTGTCTGGTCCTATACCTGCTGAACTTGGCAGCCTTAAGCACCTAAACCTTTTGCTATTGGAAAGCAACAATTTCAGTTCTTCCATCCCGCACTCACTGTCCCAACTCAAATCAGTAAAAGATCTTGATCTGTCCAACAATCAGTTGACAGGGAATATCCCTGAGAACCTATCTGCATTAATCCCCAGAGCTATTAACTTATCAAATAATCATCTTTATGGTCCAATTCCCTACCAGTTTATTGAAGGAGGTCTGGAAGAAAGTTTTTTGGGTAATCCAGGGCTATGTGTGACAGGTTATACTGATTCACTGAGTAGAAGATTCCCACCTTGCCCTCAGGCTAACAAATGGAAAAGACTTACCTGGATATGGGTAACAGTTGCTTTAGCAATTGTGATGTTAGCTGGAGCTCCGCTGTTCCTGAAACACTGCCTGAGCAAAGGGAAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_365561.p1 GENE.R_Transcript_365561~~R_Transcript_365561.p1 ORF type:complete len:616 (+),score=79.27,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.022,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|1.2e+03,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|12,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_4|PF12799.3|7.1,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.039,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|35,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|4.8,LRR_4|PF12799.3|2.6,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|18,LRR_1|PF00560.29|9.3e+03,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|3.8e+02 R_Transcript_365561:118-1965(+)
MALHAICLSSLIILLLHVDLFRATSDKQSQYFNLMKSSFSGDALSDWRIKGEDSYCNYTGIICNPRGQVTKIDISGWSLKGSFPPDVCSYLPKLRALDISSNFIHGSFPVSITNCSLLEELDMSNLYLRGKLPDFSPMKSLRVLQVSSNQFTGEFPMSITNLTNLEVVNFNENEKLNYWELPENITRLTRLKTLILSTTFLRGRILPSIGNMTSLVDLELSGNYLTGHIPPELGKLKNLKSLMLYYNMLITGSIPEELGNLTELTELDMSVNLLTGRIPESIARLPKLQVLQLFNNSLSGEIPASLGQSSTLSYFSVYENFLTGEVPENLGNSSIMMEVDMSENYLSGKLPPNICRGGKLELFLALSNRFTGEIPESYTTCTSLIRFRVSKNQLVGLVPQGIFGLPRVNVIDLSFNQLTSPIPIEIKNAKNMSEFMAAHNKLSGVLPPEISEARKLVKIDLRNNLLSGPIPAELGSLKHLNLLLLESNNFSSSIPHSLSQLKSVKDLDLSNNQLTGNIPENLSALIPRAINLSNNHLYGPIPYQFIEGGLEESFLGNPGLCVTGYTDSLSRRFPPCPQANKWKRLTWIWVTVALAIVMLAGAPLFLKHCLSKGKK*

Click here to download the sequence:
Link to NCBI Protein BLAST