Transcript Information: R_Transcript_36600.p1


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value1E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.925073045847
Replicate 29.6281377599599
Replicate 313.16188237569
Condition 2: 8 Hour
Replicate 111.498886853679
Replicate 216.678005793149
Replicate 320.357883734467
Condition 3: 24 Hour
Replicate 121.308903946156
Replicate 218.643395636786
Replicate 323.217896684444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36600.p1 GENE.R_Transcript_36600~~R_Transcript_36600.p1 ORF type:internal len:181 (+),score=40.91,RRM_1|PF00076.18|0.062,RRM_1|PF00076.18|0.00011,RRM_6|PF14259.2|1.2e-06 R_Transcript_36600:1-540(+)
CACAGATCTCGTTCAAGGGGAAGATCTGAGCACAGGTCATCCGAACACAGGTCAAAGTCAAGGTCACGATCCCGTTCTCGTTCCAAAAGCAAAAGAATAAGCGGGTTCGATATGGCACCTCCTGCTTCTGCTATGCTAACTACTGCAACAGCCTTCACAGGTCAGATTCCTGGAGCAGCTCCAGCCATTCCTGGAATGTTCCCCAACATGTTTCCATTGGCTTCTGGACAGCAGTTAGGAGCTATTCCTGTTATGCCTGTGCAGGCTATGACTCAGCAGGCTACTAGGCATGCTCGGCGAGTATATGTTGGAGGGCTTCCCCCTACTGCTAATGAACAGTCTGTCGCAACATTCTTTAGTCACGTTATGGCTGCAATCGGGGGCAATACTGCTGGACCAGGTGATGCTGTTGTCAATGTCTATATAAATCATGAAAAGAAGTTTGCTTTTGTGGAGATGAGGTCTGTGGAGGAGGCTAGTAATGCTATGGCATTGGATGGCATTATATTTGAGGGCACACCTGTCAAGGTGAGACGGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36600.p1 GENE.R_Transcript_36600~~R_Transcript_36600.p1 ORF type:internal len:181 (+),score=40.91,RRM_1|PF00076.18|0.062,RRM_1|PF00076.18|0.00011,RRM_6|PF14259.2|1.2e-06 R_Transcript_36600:1-540(+)
HRSRSRGRSEHRSSEHRSKSRSRSRSRSKSKRISGFDMAPPASAMLTTATAFTGQIPGAAPAIPGMFPNMFPLASGQQLGAIPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTPVKVRRP

Click here to download the sequence:
Link to NCBI Protein BLAST