Transcript Information: R_Transcript_366621.p1


Annotated TAIR IDAT4G25433.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13001463-13001795 | Reverse length=110
E-Value1.2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2270428207238
Replicate 22.6680381744467
Replicate 34.1763665230554
Condition 2: 8 Hour
Replicate 11.7586532835038
Replicate 24.0768458605476
Replicate 34.2119759450622
Condition 3: 24 Hour
Replicate 11.1415484256869
Replicate 21.9496361450234
Replicate 31.3301919975462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_366621.p1 GENE.R_Transcript_366621~~R_Transcript_366621.p1 ORF type:5prime_partial len:181 (+),score=6.94 R_Transcript_366621:2-544(+)
AAGGCGCCACACCAGAAAGGGACATGTGCCTGGAGTCCAAACGTGTGCTCTCCCGATCCCGTCCAAAAAAAAAAACTAATAACCCCCCCCCCCCCAAAAAAAAAAAAAAATCAATTACTACATATCAAAATGGCTCTTTCCACAACCCAAAAAAGATCTTCCCAAATAAGAGCAACAATAGCCATAGCTGATACAGCCTCATGGTACTGTTCCATTATAATTGTCACCTTAATCTTGTTCACCACTTTCAAGGACTCTTACCCTACTACACCTTTAAGCCCCGGTGGTGATGATCTTGGTGTTGCTGCTCATCAATCCTCTCTCGACTCAAACGGGGCCCGCCTTCTCGACCGCCCTTGCGACGAAATCTACGTTGTTAGTGAAGGAGAGACTCTCCATACCATCAGTGATAAGTGTGGTGACCCGTTTATTGTCGAACGGAACCCCCATATTCATGACCCGGATGATGTCTTTCCGGGCCTTGTCATCAGGATCATGCCCGTTGCCATTGATAATAATCACAACAGGAAGTTGCTAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_366621.p1 GENE.R_Transcript_366621~~R_Transcript_366621.p1 ORF type:5prime_partial len:181 (+),score=6.94 R_Transcript_366621:2-544(+)
KAPHQKGTCAWSPNVCSPDPVQKKKLITPPPPKKKKNQLLHIKMALSTTQKRSSQIRATIAIADTASWYCSIIIVTLILFTTFKDSYPTTPLSPGGDDLGVAAHQSSLDSNGARLLDRPCDEIYVVSEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIRIMPVAIDNNHNRKLLR*

Click here to download the sequence:
Link to NCBI Protein BLAST