Transcript Information: R_Transcript_366622.p1


Annotated TAIR IDAT5G62150.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24958325-24958633 | Forward length=102
E-Value1.2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21101688964993
Replicate 20.48546359344042
Replicate 30
Condition 2: 8 Hour
Replicate 12.1230518740386
Replicate 20.90477556582832
Replicate 31.9935294901003
Condition 3: 24 Hour
Replicate 12.1232654083426
Replicate 20.89240931927191
Replicate 32.6568890082361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_366622.p1 GENE.R_Transcript_366622~~R_Transcript_366622.p1 ORF type:5prime_partial len:173 (+),score=6.64 R_Transcript_366622:1-519(+)
TTTCCCCCCCCCCCCCAAAAAAAAACCGCCCCAAAAAAAAAAAAAAAAAAAACTAATAAACCCCAAAACAAAAATACTCCTAATCAATTAGTACTACATATCAAAATGGCTCTTTCCACAACCCAAAAAAGATCTTCCCAAATAAGAGCAACAATAGCCATAGCTGATACAGCCTCATGGTACTGTTCCATTATAATTGTCACCTTAATCTTGTTCACCACTTTCAAGGACTCTTACCCTACTACACCTTTAAGCCCCGGTGGTGATGATCTTGGTGTTGCTGCTCATCAATCCTCTCTCGACTCAAACGGGGCCCGCCTTCTCGACCGCCCTTGCGACGAAATCTACGTTGTTAGTGAAGGAGAGACTCTCCATACCATCAGTGATAAGTGTGGTGACCCGTTTATTGTCGAACGGAACCCCCATATTCATGACCCGGATGATGTCTTTCCGGGCCTTGTCATCAGGATCATGCCCGTTGCCATTGATAATAATCACAACAGGAAGTTGCTAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_366622.p1 GENE.R_Transcript_366622~~R_Transcript_366622.p1 ORF type:5prime_partial len:173 (+),score=6.64 R_Transcript_366622:1-519(+)
FPPPPQKKTAPKKKKKKTNKPQNKNTPNQLVLHIKMALSTTQKRSSQIRATIAIADTASWYCSIIIVTLILFTTFKDSYPTTPLSPGGDDLGVAAHQSSLDSNGARLLDRPCDEIYVVSEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIRIMPVAIDNNHNRKLLR*

Click here to download the sequence:
Link to NCBI Protein BLAST