Transcript Information: R_Transcript_366642.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.06940289336395
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.8620429617677
Replicate 20
Replicate 30.069017530875996
Condition 3: 24 Hour
Replicate 10
Replicate 20.083860299964172
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_366642.p1 GENE.R_Transcript_366642~~R_Transcript_366642.p1 ORF type:complete len:263 (+),score=20.69,LRR_8|PF13855.2|2.2e-08,LRR_8|PF13855.2|7.6e+02,LRRNT_2|PF08263.8|6.1e-08,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|3 R_Transcript_366642:47-790(+)
ATGGGAAGCTCCCCAAGCCTCTTCATGCACTTTCTCAAAACCTCTCTCATCCTCCTCTCATTCTTCACCATCTCCCAAGCTGAAATCGCATCCTGCCATCCAAAAGACCGAGCCATCCTCCTCCAAATCAAAGCCCACATCAAGAGCCCCGATTCGACCCATCTCGGCTCACTGGACACCTGGCAACCCGACTCAAACTGCTGCTTCTGGCCCTTCGTCGGGTGCACCACCGTCGAAAGCCCCCACCCGGGCCGTGTTAACGGCATCACCATAAGTGGCGGGAGTGGCCTCGCTGGCACGATCCCCGAGGTGATCGGGGACTTGCCTTTCCTAGAGGAGATCATGTTCTTCGACGAGCCAAAACTCACCGGCCCACTCCCAAAATCCTTGATCAAGCTCAAGAACCTTGAGCTCATCTATCTCAACTCCAACAGTCTCTCGGGAACTATCCCTAACTTTCTTGGCCAGCTTAAAAGACTTCGAGGGATCGATATATCGGATAACAAGTTTTCGGGCGTTATTCCGCCTTCGATTTCTAGCCTAGCCAAACTCACTTCCTTCAATGTGTCCCATAATATGTTGAAGGGTTCTGTCCCCACTATGCAGACTCTGAAACTGAAGGAGTTTGATGTTAGCTTTAACTTGCTTTGTGGGGTTATTCCTAGTGGGTTAAGGAAGCTTGATGCCAAGAAATTTGGGCATAATAAGTGCCTTTGTGGTCCTCCCTTGGCTGCTTGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_366642.p1 GENE.R_Transcript_366642~~R_Transcript_366642.p1 ORF type:complete len:263 (+),score=20.69,LRR_8|PF13855.2|2.2e-08,LRR_8|PF13855.2|7.6e+02,LRRNT_2|PF08263.8|6.1e-08,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|3 R_Transcript_366642:47-790(+)
MGSSPSLFMHFLKTSLILLSFFTISQAEIASCHPKDRAILLQIKAHIKSPDSTHLGSLDTWQPDSNCCFWPFVGCTTVESPHPGRVNGITISGGSGLAGTIPEVIGDLPFLEEIMFFDEPKLTGPLPKSLIKLKNLELIYLNSNSLSGTIPNFLGQLKRLRGIDISDNKFSGVIPPSISSLAKLTSFNVSHNMLKGSVPTMQTLKLKEFDVSFNLLCGVIPSGLRKLDAKKFGHNKCLCGPPLAACK*

Click here to download the sequence:
Link to NCBI Protein BLAST