Transcript Information: R_Transcript_367539.p1


Annotated TAIR IDAT3G07970.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)QRT2
Annotation TypeOrtholog
Chromosome Positionchr3:2541006-2543370 | Forward length=439
E-Value7.6E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39253679472513
Replicate 20.090306668457196
Replicate 30.098523602564097
Condition 2: 8 Hour
Replicate 10.73720883712136
Replicate 20.76940668700854
Replicate 31.3662502617496
Condition 3: 24 Hour
Replicate 10.1974865137867
Replicate 20.14229199284243
Replicate 30.28242199595996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_367539.p1 GENE.R_Transcript_367539~~R_Transcript_367539.p1 ORF type:complete len:465 (+),score=50.00,Glyco_hydro_28|PF00295.13|1.4e-101 R_Transcript_367539:33-1397(+)
ATGTGTCCAAAAGGTCATTTCCTCATACTTGTTGTTCTTACCATTGTAACAATCTCATCATTCTTTCCCTTTTGTCTTTGTAGTTACCCTTTCCCCGAGCTTGACATCAAAAATTACCATACAACTAAAAATTATTCTAGTGATATCACAGAAAAGGAAGAGGTCCTACAGGGGAATTATTATGCGCTTGGCTTGCAAACTCTAGTCGATGATGTTATGCCAGCCCGAGCCCTTGCTCCTTCTTCTTCCCCTCCTAGAGTGGTTAGCGTAGATGATTACTTGGGGTCGGATAGAAGGAAGGATCATACCAAGGCATTTAAGAAAGCTTGGAAGGAGGCTTGTTCTACAAGGGCTGGAGTTTTCCTTGTGCCCAAAAAGAAATACAGAGTCAGGCCAATAACATTCTCAGGCCCCTGCCATTCTCATTTTACTATAAAGATCTTAGGAACCATTGAGGCCTTGGAAAATATGATGGATTACAAAGATAGAAGACATTGGCTAGTGTTCCAGAATATACGCAACTTCCAAATGCAAGGTGGAGGAACCATTGATGGTAAGGGAAATATTTGGTGGCAAAACTCTTGTAAGATCAACAAAACCAAGCCCTGCACACATGCACCTACGGCGATGACATTCTATGAATGCAAGAATTTCAGAGTAGATGGACTGAGGTTAATGAATGCACAGCAAATGCACCTCTCGTTTCAGAAATGTGCAATTGTCAGAGTTACAAATTTGTTCATAAGTGCACCAGAACATAGCCCTAACACGGATGGTATTCATATCACTCAGACAAGAAGTATTCAAATTAAAAGAACTCGCATTCAAACAGGTGATGACTGCATATCAATAGTAAGTGGGTCAAAAATTGTGGAAGCAACAGACATAAGTTGTGGACCAGGGCATGGAATCAGTATTGGAAGCCTAGGGAAAGGAGGATCAAAGGCCCATGTTTCAACTGTATTGGTAAGAAGGGCAAAATTTTCAGGTACTACAAATGGAGTGAGGATTAAGACATGGCAGGGAGGGCGCGGATATGCAAAAAACATTGCATTCGAAAATATATCTATGCGAAACGTTAGTAATCCAATAATCATCGACCAACATTACTGTGATCAAAAAGAGCCATGCCCAGAAAGAAAAATGGCAGTGCAAGTGAAGAATGTGGTGTACAAAAACATAAAAGGGACAAGTGCTACAGAAGTTGCCATAAAATTGGATTGCAGCAAAAGGCATCGATGCGGAGGGATTGTGTTGGAAAATGTCAAGCTGAAGGGAGAAGACCACAAACAAGTCAAGGCTGATTGTCATAATGTTAAATTGTATCAAAGAGGAAAGGTTTCACCTAAATGCTTTCCTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_367539.p1 GENE.R_Transcript_367539~~R_Transcript_367539.p1 ORF type:complete len:465 (+),score=50.00,Glyco_hydro_28|PF00295.13|1.4e-101 R_Transcript_367539:33-1397(+)
MCPKGHFLILVVLTIVTISSFFPFCLCSYPFPELDIKNYHTTKNYSSDITEKEEVLQGNYYALGLQTLVDDVMPARALAPSSSPPRVVSVDDYLGSDRRKDHTKAFKKAWKEACSTRAGVFLVPKKKYRVRPITFSGPCHSHFTIKILGTIEALENMMDYKDRRHWLVFQNIRNFQMQGGGTIDGKGNIWWQNSCKINKTKPCTHAPTAMTFYECKNFRVDGLRLMNAQQMHLSFQKCAIVRVTNLFISAPEHSPNTDGIHITQTRSIQIKRTRIQTGDDCISIVSGSKIVEATDISCGPGHGISIGSLGKGGSKAHVSTVLVRRAKFSGTTNGVRIKTWQGGRGYAKNIAFENISMRNVSNPIIIDQHYCDQKEPCPERKMAVQVKNVVYKNIKGTSATEVAIKLDCSKRHRCGGIVLENVKLKGEDHKQVKADCHNVKLYQRGKVSPKCFPD*

Click here to download the sequence:
Link to NCBI Protein BLAST