Transcript Information: R_Transcript_36759.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47854204750199
Replicate 20.3145513170981
Replicate 31.2011023458657
Condition 2: 8 Hour
Replicate 10.55024415611787
Replicate 20.41874310564018
Replicate 30.54386848300785
Condition 3: 24 Hour
Replicate 10.60189007713082
Replicate 20.41301982941156
Replicate 30.73778779843474


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36759.p1 GENE.R_Transcript_36759~~R_Transcript_36759.p1 ORF type:3prime_partial len:267 (+),score=5.35,gag_pre-integrs|PF13976.2|7.2e-13 R_Transcript_36759:809-1606(+)
ATGGATACTGCTATGGCCCAAACAACTATGAATGGTGAAGATATATGCCTTGCCGATAGTGCTACTACACACACCATACTCAAGAACAAAGAATATTTCTCTGATATCAAAATACATAAAGCTAATGTTAGTACTATAAGTGGTACTGCAGCTTTGATAGATGGCTCCGGAAGAGACAATCTGGTGTTACCTGGAGGAACGAAATTTCAAATTGTTGATGCACTATATTCCCCCAAGTCTAAGAGAAATTTGTTAAATTTTAAAGATATCCGCAGAGATGGCCATCACATTGAGACTACTAGTGAAGGAGATGTTAAGTATTTATATGTAACTAATAGATTATCGGGTACCAAACAAGTGTTAGAAAGACTACCCGCATTATCTTCTTGTTTGTACTACACGAGAATTAGTACAATTGAATCACATACGATCATAAACCAGAAGTTTATTGATCATAATAACTTTAAAATATGGCATGACCGGTTGGGTCATCCCGGATCATCAATGATGCGAAAAATTGTTAAAAACTCATGTGGACACCCATTGAAGGACCAGAAGATTCTTCAATCAAATGAGTTCATTTGTGCTGCTTGCTCACAAGGCAAGTTAATAATTAGACCTTCGCCAGCTAAAATAGGGTATGAATCCCTTAACTTTTTAGAACGTATACAAGGCGATATATGTGGACCGATTGATCCACCATGTGGACCATTTAGATATTTTATGGTTTTAATAGATGCATCAACAAGATGGTCACATGTATCTTTATTGTCTACTCGCAACCTGGCGTTTGCGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36759.p1 GENE.R_Transcript_36759~~R_Transcript_36759.p1 ORF type:3prime_partial len:267 (+),score=5.35,gag_pre-integrs|PF13976.2|7.2e-13 R_Transcript_36759:809-1606(+)
MDTAMAQTTMNGEDICLADSATTHTILKNKEYFSDIKIHKANVSTISGTAALIDGSGRDNLVLPGGTKFQIVDALYSPKSKRNLLNFKDIRRDGHHIETTSEGDVKYLYVTNRLSGTKQVLERLPALSSCLYYTRISTIESHTIINQKFIDHNNFKIWHDRLGHPGSSMMRKIVKNSCGHPLKDQKILQSNEFICAACSQGKLIIRPSPAKIGYESLNFLERIQGDICGPIDPPCGPFRYFMVLIDASTRWSHVSLLSTRNLAFAR

Click here to download the sequence:
Link to NCBI Protein BLAST