Transcript Information: R_Transcript_36801.p1


Annotated TAIR IDAT3G55460.1
Annotated Gene NameSC35-like splicing factor 30
Annotated Gene Symbol(s)SCL30, At-SCL30
Annotation TypeHomolog
Chromosome Positionchr3:20561024-20563502 | Forward length=262
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.637783426836
Replicate 277.717649302118
Replicate 374.532370088974
Condition 2: 8 Hour
Replicate 169.193887015101
Replicate 281.211162905798
Replicate 375.044718535033
Condition 3: 24 Hour
Replicate 185.54924185846
Replicate 278.565001819171
Replicate 383.412844727181


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36801.p1 GENE.R_Transcript_36801~~R_Transcript_36801.p1 ORF type:complete len:201 (+),score=38.42,RRM_1|PF00076.18|8.9e-07,RRM_5|PF13893.2|5.7e-06 R_Transcript_36801:1376-1978(+)
ATGAAGTACATATGTCCATCATCATGCAGGGAACCTCGTGGATTTGCTTTTGTGCAGTTTGTGGACCCTTATGATGCTTCAGAGGCTCAATATCACCTGAATGGGCAGATATTTGCTGGAAGAGAGATAAGTGTAGTTGTTGCTGCTGAGTCAAGGAAAAGGCCTGAAGAGATGCGCCGGAAAACCAGGCAGAGAAGTGGGCCAAGATACAGTACACGACGGTCACCTTTTTACAGGCACTCACGTTCCCGTTCAGCTTCACGCTCACGCTCTCCCCTCTATCGTTCTGGTTCCAGAGGGGGTCATCGCTCTAGGTCCTATTCCATCTCTCCTAAAAGACGTGAGGAGTATTCTGTGTCACCAAGTAGAAGACCTGTCAGTCGATCTAGATCTCCCAGGGATTCTCCACGTGGTGGAGATGGCCGCAGATCATACTCACCTTATCATTATGGTCAGAATGAACCTGAAAATGGGTATGACAAGAAACCCAAGTACGAAGCTGATGACACACGAGGTCGGAGTGAGTCTCCTAGGCGATTGTCAAGATCTCCATCTGGATCCAGATCTCGATCTGCTGATGTTTCACCAGCACGAAGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36801.p1 GENE.R_Transcript_36801~~R_Transcript_36801.p1 ORF type:complete len:201 (+),score=38.42,RRM_1|PF00076.18|8.9e-07,RRM_5|PF13893.2|5.7e-06 R_Transcript_36801:1376-1978(+)
MKYICPSSCREPRGFAFVQFVDPYDASEAQYHLNGQIFAGREISVVVAAESRKRPEEMRRKTRQRSGPRYSTRRSPFYRHSRSRSASRSRSPLYRSGSRGGHRSRSYSISPKRREEYSVSPSRRPVSRSRSPRDSPRGGDGRRSYSPYHYGQNEPENGYDKKPKYEADDTRGRSESPRRLSRSPSGSRSRSADVSPARSR*

Click here to download the sequence:
Link to NCBI Protein BLAST