Transcript Information: R_Transcript_36804.p1


Annotated TAIR IDAT3G55460.1
Annotated Gene NameSC35-like splicing factor 30
Annotated Gene Symbol(s)SCL30, At-SCL30
Annotation TypeOrtholog
Chromosome Positionchr3:20561024-20563502 | Forward length=262
E-Value1.2E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.053495700744
Replicate 213.122687760186
Replicate 321.134192425022
Condition 2: 8 Hour
Replicate 118.218649514319
Replicate 224.091188174135
Replicate 319.880335441376
Condition 3: 24 Hour
Replicate 125.827533131167
Replicate 219.954758043856
Replicate 323.320828208063


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36804.p1 GENE.R_Transcript_36804~~R_Transcript_36804.p1 ORF type:3prime_partial len:168 (+),score=39.83,RRM_1|PF00076.18|4.2e-18,RRM_6|PF14259.2|3.5e-14,RRM_5|PF13893.2|3e-07 R_Transcript_36804:163-663(+)
ATGAGGAGGTACAGTCCAGGGTACTACAGTCCTCCACGTAGAGGATACGGTGGCCGAGGAAGAAGCCCACCACGTGGTGGATATAGTCCTCCCCCAAGAAGGGGTTACAGTCCTCCCCCAAGAAGGGGTTATAGTCCTCCCCCAAGAAGGGGATATGGTGGAGGCGGCGGCGGCGGTTATGGAAGACGTAAGGAGCCTAATCACGGAAGCTTGTTGGTCCGTAACATTCCTCTCGACTGCAGGCCAGAAGAGCTTCGAGTTCCCTTTGAAAGGTTTGGGCTTGTTCGTGATGTCTATATCCCGAAGGATTATTACACAGGGGAACCTCGTGGATTTGCTTTTGTGCAGTTTGTGGACCCTTATGATGCTTCAGAGGCTCAATATCACCTGAATGGGCAGATATTTGCTGGAAGAGAGATAAGTGTAGTTGTTGCTGCTGAGTCAAGGAAAAGGCCTGAAGAGATGCGCCGGAAAACCAGGCAGAGAAGTGGGCCAAGATAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36804.p1 GENE.R_Transcript_36804~~R_Transcript_36804.p1 ORF type:3prime_partial len:168 (+),score=39.83,RRM_1|PF00076.18|4.2e-18,RRM_6|PF14259.2|3.5e-14,RRM_5|PF13893.2|3e-07 R_Transcript_36804:163-663(+)
MRRYSPGYYSPPRRGYGGRGRSPPRGGYSPPPRRGYSPPPRRGYSPPPRRGYGGGGGGGYGRRKEPNHGSLLVRNIPLDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVQFVDPYDASEAQYHLNGQIFAGREISVVVAAESRKRPEEMRRKTRQRSGPRY

Click here to download the sequence:
Link to NCBI Protein BLAST