Transcript Information: R_Transcript_368406.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24017053887788
Replicate 20
Replicate 30.15070222102732
Condition 2: 8 Hour
Replicate 10.16109121675819
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.29020077487602
Replicate 30.14399805715064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_368406.p1 GENE.R_Transcript_368406~~R_Transcript_368406.p1 ORF type:5prime_partial len:152 (-),score=4.57,RVT_1|PF00078.23|1.6e-10 R_Transcript_368406:893-1348(-)
TTCATTAGAAACTGTCTGAAAGCCTTGAATGTGGATGAGGATTCAATCAAGCTAATCATGAACTGTATTTGCACAACCTCTGCCTCTTTGATCATTAATGGTAACCTGTCTGACTGGTTCATTCCTTCTAGTGGTATTAGACAAGGCGACCCTCTTTCCCCCTATATCTTCATCATTTGTATGACATGCTTTCTAGGCTTATTCAAGACTCCTGTGATCGAAATTTATGGTTCCCGTTTTGCATTGGTAAGAAAAAGATTCCCATTTCTCATCTCCTTTTTGCGGACGACCTTATTCTCTTTGGGGAAGCAAATGAGTAAACTTTCAATGCTGTTTCTGAAACCCTTTATCTTTTCTGTAGTGTTTCTGGTCAGAAAGTCAATTGAGATAAGAGCAAACTATTTTTCTCCCCTAACACCAATGACCTTGATAAACAATTGGGCCAACAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_368406.p1 GENE.R_Transcript_368406~~R_Transcript_368406.p1 ORF type:5prime_partial len:152 (-),score=4.57,RVT_1|PF00078.23|1.6e-10 R_Transcript_368406:893-1348(-)
FIRNCLKALNVDEDSIKLIMNCICTTSASLIINGNLSDWFIPSSGIRQGDPLSPYIFIICMTCFLGLFKTPVIEIYGSRFALVRKRFPFLISFLRTTLFSLGKQMSKLSMLFLKPFIFSVVFLVRKSIEIRANYFSPLTPMTLINNWANKS*

Click here to download the sequence:
Link to NCBI Protein BLAST