Transcript Information: R_Transcript_36848.p1


Annotated TAIR IDAT5G27220.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9578757-9582752 | Forward length=1181
E-Value9.4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2149355944504
Replicate 20.39929572899457
Replicate 31.5973002444227
Condition 2: 8 Hour
Replicate 10.9313165748556
Replicate 21.4883629751661
Replicate 30.74792690353417
Condition 3: 24 Hour
Replicate 10.76404746716606
Replicate 20.45438726715928
Replicate 30.90187055762176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36848.p1 GENE.R_Transcript_36848~~R_Transcript_36848.p1 ORF type:complete len:631 (+),score=168.61,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.2e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|2.5e-36,Frigida|PF07899.7|3.6e-07 R_Transcript_36848:281-1894(+)
ATGGAGGAGAAAGAGAAGCAACTTGTTAGGCGTAGTAAAGTTCTAGATTGGAAGGACAAGAAAATTGACGAGTGTAGCAGAGGGCTAGAATTGAAAGAGAGTGAAGTCAATAAACGATACCAAGAGATTGAATTGAAAGAGAAGGAAATGAATGAAGCACAAGAGTTGAAAGAGAAGCAATTGAAAGAGGCTCTTGATACCCTGGAACTGAAAACAAAACAACTAGAAGAACATTGCCAAAAGACAGCGTTGAAAGAGAAGAAGATCAATGAGCTTTACCAAGTAATAGAGACAAATGAACAGCAAATGACTATGCGTGTCAACGCTCTATTCTTGAGTTTAGAGTTGAAAGAGAAAGATGCCAATGAACTTAGCAAAGAGCTAGAATTGAAAGACAAGGAAATGAGTGATTTGCGCCAATCACAAAAATTGAAAGAGAAGCAATTGAAAGTTGCTCTTGAAAACCTTGAGTTGAAAACAAAACAACTAGAAGAACAAAGCCACAAGACAGAATTGAAGGAGAAGGAAATCAGTGAGCATCACCAAGCATTAGAGATGAAGGAAAAGCAATTGAATATGCGTAGCAAAGGGCTTGATTTGAAGGAGAAAGATGTCAATGAGCGATGCCAAGAACTTGAACTAAAAGCACAAAAGTTAAAAGAGAACCAAATGCAAGGGGGTTGCAATCATTGTGAAATTCGTTGCTTTTGTAGAAGAATGGATGCAAATGGTTTGATATCATATCTAATTGCCCATGTGAATCAGCATGATAAGCTGCATAGTGAGCTTTTGGATGCTCTCAGAATTGCATCTGATCCCGCAAAGCTTGTTCTTGATGTTTGTCGGTATTCCCACGAATCAAACTTCAATGAGGTTCTTGCAGATCATCACAAAACCAGCTGTATAATTCTTTTGGAGATGTTGGCAAAGTTAGAACCAGAGTTGGAACCTGAAATCAAAGATGAAGCAAGAAGCTTTGCCGCTGTATGGAGAGCTAGTTTGAAGAATATCAACCCTAATGTGGATACTTATGGGTTTTTGCAGTTTTTAGCAGCATATGACTTAGCAAGTTCATATAAAGTGGAGGAGCTTCTTTCACTTTTTAAGAACTTCTATCGTGTGCCTGAGGTTTATCGTCGTGAGCAACACATGAAGCTATGCTGTTCTTTGGGAATTGTACATAGGATGCCAGGTTCTCTTCTAAACGAACATGTGGGGTTTGTAAAGCAAAAGGCAAAGGAGAAACTCAAGGGTGGAACTTTTAAAGCAAAGGGTGAGGCATTGGACTATGAACATACTGCTCTTGTAGCTGTATTAAAATGCATTTCACAGTTCACCCTCCTGTCACAATTCCAATCCAAGCACATTGAACAGCGAATCAAGCAAATCGAAGTCGAAATGGAGAAACGATGTAAGGGTAGTGTTGCACACATTGAGCAATCGACAAATCAGATAAATTCTGGAAACTCCAAACACAAGATGGCAGAAGTCAACATCAATTCACAAGCGGATAGACAGGCTGGGAAGAAACGCATTGCAAGGCCGAGTATAGCATCTGTAGGATCTCCAGACTCTCAAGCAAAGCGTCCCCGAATAGGGGCTGCAAAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36848.p1 GENE.R_Transcript_36848~~R_Transcript_36848.p1 ORF type:complete len:631 (+),score=168.61,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.2e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|2.5e-36,Frigida|PF07899.7|3.6e-07 R_Transcript_36848:281-1894(+)
MEEKEKQLVRRSKVLDWKDKKIDECSRGLELKESEVNKRYQEIELKEKEMNEAQELKEKQLKEALDTLELKTKQLEEHCQKTALKEKKINELYQVIETNEQQMTMRVNALFLSLELKEKDANELSKELELKDKEMSDLRQSQKLKEKQLKVALENLELKTKQLEEQSHKTELKEKEISEHHQALEMKEKQLNMRSKGLDLKEKDVNERCQELELKAQKLKENQMQGGCNHCEIRCFCRRMDANGLISYLIAHVNQHDKLHSELLDALRIASDPAKLVLDVCRYSHESNFNEVLADHHKTSCIILLEMLAKLEPELEPEIKDEARSFAAVWRASLKNINPNVDTYGFLQFLAAYDLASSYKVEELLSLFKNFYRVPEVYRREQHMKLCCSLGIVHRMPGSLLNEHVGFVKQKAKEKLKGGTFKAKGEALDYEHTALVAVLKCISQFTLLSQFQSKHIEQRIKQIEVEMEKRCKGSVAHIEQSTNQINSGNSKHKMAEVNINSQADRQAGKKRIARPSIASVGSPDSQAKRPRIGAAKC*

Click here to download the sequence:
Link to NCBI Protein BLAST