Transcript Information: R_Transcript_368963.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0653827557543
Replicate 21.4424939217304
Replicate 31.2240241463593
Condition 2: 8 Hour
Replicate 13.5513849923485
Replicate 22.0483250541544
Replicate 32.9098001757872
Condition 3: 24 Hour
Replicate 13.1545078633487
Replicate 21.1785252842293
Replicate 36.0149417460176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_368963.p1 GENE.R_Transcript_368963~~R_Transcript_368963.p1 ORF type:complete len:131 (-),score=23.55,SEO_C|PF14577.2|2.9e-08 R_Transcript_368963:162-554(-)
ATGCACGCATTTGAGATCATCTGGATCCCAGTTGTAGACCGTTCAGAGCCGTGGACTGATGCTATGAAAGCTCAGTTCCTGAACTTGCAGGCCTCAATGCCCTGGCACTCGGTACATGACCCTTTGATAATTGAAAATTCAGTGATCAGATTCTTCAGGGAGGATTGGCATTACAAGGGCAAGCCTATCCTTGTGGTGCTAGACCCTCAGGGGAAAGTTGTGAGCCCAAATGCAATTCACATGATGTGGATTTGGCAAAGCAATGCTTTCCCCTTCACAAGCATCAGGGAGGAGCTGCTTTGGGAGCAGGAGAATTGGCGGCTCGAGCTCCTTGTTGATGATATCGATCCTACAGTTTCTGATTGGGTAATTTCTCTTCTCTTGATTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_368963.p1 GENE.R_Transcript_368963~~R_Transcript_368963.p1 ORF type:complete len:131 (-),score=23.55,SEO_C|PF14577.2|2.9e-08 R_Transcript_368963:162-554(-)
MHAFEIIWIPVVDRSEPWTDAMKAQFLNLQASMPWHSVHDPLIIENSVIRFFREDWHYKGKPILVVLDPQGKVVSPNAIHMMWIWQSNAFPFTSIREELLWEQENWRLELLVDDIDPTVSDWVISLLLIY*

Click here to download the sequence:
Link to NCBI Protein BLAST