Transcript Information: R_Transcript_3690.p1


Annotated TAIR IDAT4G15420.1
Annotated Gene NameUbiquitin fusion degradation UFD1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8823822-8825949 | Forward length=561
E-Value2.7E-276
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.213226127673
Replicate 215.414537453515
Replicate 320.043395396633
Condition 2: 8 Hour
Replicate 114.613922917458
Replicate 219.762610359639
Replicate 324.031709835442
Condition 3: 24 Hour
Replicate 120.411430721814
Replicate 220.540901325907
Replicate 320.26924765019


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3690.p1 GENE.R_Transcript_3690~~R_Transcript_3690.p1 ORF type:complete len:568 (+),score=125.29,UFD1|PF03152.10|1.9e-45 R_Transcript_3690:235-1938(+)
ATGGATTTCGAGCTGCGAAGAGCGAGAGAGAAGCTACAGAGAGAGCAAAAGGAGAGAAAAGAGAGAGCAAGATTGAAACTTGAACGCGAAAAGAAAGCCAAAGAAGAAGCTTCTCGAAATCGCCAGGCTCTTGAAGCTGTTCAACGTGCTCGTCGTCTCGATGCTGCCCAAGCTCAGCAAATTGCGGATATGCAAATGGCTGAAAGTTTGTTGTCTGGGGGAGGAATCATGTTCTCCCGTGTCTTAGAAGCTGGGCCTTATCCTGGTGTTGGGGATAAGATTAAGCTGCCACCATCTTGCTTCACTGAATTATCAGATCAAGGTGCTTTTGACAAAGGACCTGTGTACTTCCGGTTGTCCATCGCTGGTCAGGAGAGTTCTCTCAATACATCTGCTAACAAGGATGGTCCACGGGTGACTCATTCAGGTGTGTTGCAGTTCACTGCAGAAGAAGGATCTGTTGCTCTTCCTCCACATGTATGGAGTAATTTATTCCCTTCAGAACCACCAGAGACTCCCTTGATTGAGGTTCGATATGTTCGATTGCCAAAAGGATCATATGCAAGACTTCAACCGGAGGAGGCTAGCTTTTTAGATGTACCGAATCACAAGGCTGTCCTTGAGACGGCACTTCGTCAGCATGCTACTCTGTCCCAGGACGACGTTATCACAGTTAGGCATGGTGGGCTTGTATTCAAGCTTCGTGTGCTCGATTTGAAGCCCTCTTCAAGTGTTTCTGTGTTAGAGACAGATATTGAAGTTGACATCGTCAATCCTGTTACATCTTCAGAGACGAGTAATCAGAATATGTTGAAACCACTCACCTTTGGAACATCGGAGTCTGGCATTGTTGAGGAAGGCCAATATACGTATTACAAATTCTTGCTTGACAATGAGACATGGAGCAGAATGACCTCTGGGGATGCCAGAGTAGAGGTAAAGCTGGAGGTAGAGTCAGATGCTGGAGATACTGATCTTTATGTATCCAAGCATCCAGTAATGTTTCCAACACACCATCAACACCAATGGTCTTCACATGATGTGGGTTCCAAGGTTTTGATTCTTAGTTCTCAGGATCAGAATCTGGGATTGGGGACTTATAGTGTCGGTATTTATGGTTTTAGGGGGAAAACAAAGTACAATATACTGCTCAGTGTTGTGGATAACCGTAGCCGTGGTCAGCAGGCTGGGATATCTACATCGTCTGTTGATGTAGATTCGGTGGAATGTGCAAACTGCAAACACTATATACCTAGTAGAAGTATAGCATTGCATGAAGCCTATTGTCGTAGAAACAATGTCATATGCCAGCATGCAGGTTGTGTAGTCGTTCTGAGGGTGGAGGATGCCAAGAACCATGTACATTGCAATAAATGTGGAAAGGCATTTCAGCAAGCAGAAATGGAGAAGCACATGAAAGTGTTCCATGAGCCCCTTCATTGTACCTGTGGGGTGGTTCTTGAGAAAGAAGAGATGGTCCAACATCAGTCTTCGGATTGTCCAATGCGGATGATAACATGTCGTTTTTGTGGCGACATAGTTCAAGCTGGGAGTTTCCCTATGGACATGCGAGATCGATTGAGAGGACTTTCAGAGCATGAGAGTGTTTGTGGCTCCAGAACTGCCCCATGTGATTCGTGTGGGCGTGCTGTTATGTTGAAAGAGATGGATATCCATCGGATTGCTGTTCATCCCAACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3690.p1 GENE.R_Transcript_3690~~R_Transcript_3690.p1 ORF type:complete len:568 (+),score=125.29,UFD1|PF03152.10|1.9e-45 R_Transcript_3690:235-1938(+)
MDFELRRAREKLQREQKERKERARLKLEREKKAKEEASRNRQALEAVQRARRLDAAQAQQIADMQMAESLLSGGGIMFSRVLEAGPYPGVGDKIKLPPSCFTELSDQGAFDKGPVYFRLSIAGQESSLNTSANKDGPRVTHSGVLQFTAEEGSVALPPHVWSNLFPSEPPETPLIEVRYVRLPKGSYARLQPEEASFLDVPNHKAVLETALRQHATLSQDDVITVRHGGLVFKLRVLDLKPSSSVSVLETDIEVDIVNPVTSSETSNQNMLKPLTFGTSESGIVEEGQYTYYKFLLDNETWSRMTSGDARVEVKLEVESDAGDTDLYVSKHPVMFPTHHQHQWSSHDVGSKVLILSSQDQNLGLGTYSVGIYGFRGKTKYNILLSVVDNRSRGQQAGISTSSVDVDSVECANCKHYIPSRSIALHEAYCRRNNVICQHAGCVVVLRVEDAKNHVHCNKCGKAFQQAEMEKHMKVFHEPLHCTCGVVLEKEEMVQHQSSDCPMRMITCRFCGDIVQAGSFPMDMRDRLRGLSEHESVCGSRTAPCDSCGRAVMLKEMDIHRIAVHPNN*

Click here to download the sequence:
Link to NCBI Protein BLAST