Transcript Information: R_Transcript_369022.p1


Annotated TAIR IDAT2G16190.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7020689-7021600 | Reverse length=303
E-Value1.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2920473752755
Replicate 20.50391120999115
Replicate 30.54976170230766
Condition 2: 8 Hour
Replicate 10.88149113810083
Replicate 20.35777410945897
Replicate 30.50824509737084
Condition 3: 24 Hour
Replicate 10.27549368673245
Replicate 20.26466310668693
Replicate 30.61285573123312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_369022.p1 GENE.R_Transcript_369022~~R_Transcript_369022.p1 ORF type:complete len:250 (+),score=13.96 R_Transcript_369022:1040-1789(+)
ATGATGAACAACAACAACCAAAACGTGAATAGAAAGAGGAAGATTAATAGTATGATTGATGATCTAAATGTTGGTCTTACTCTTGAAACTCCATCCATATTCATATCAACCAATTCAAGTCAGTCGTATCCATCGTCCCAAAATTATCTTAATCTTTCGAATTCCGAAATTTCATACCCACAACCACAACCACAACCACAACCACCAGCACCCACACGAGCACGGAGAAACCCTACAAGGGGTGTGGCCAAGAGCGAGACGATCACCCCTCCATTTCCATGGGCTACAGATCGACGGGCCAAGGTTTATTCCGTCAAGTTTCTAACGGAAAGAGAGATCCACGTTATATCTGGGGAAGTTCAGTGCAAGAAATGTGAGAAGAGTTTCACCCTGGAATTTAACGTCGAAGAGAAGTTCAAAGAGGTTGCATGTTTTTTACTCAATAACCAATCCACCATGCACGAACGTGCTCCTCCACAGTGGATAAGTCCATCTCTTGTAAACTGCAGATTTTGTGGTCAGATTAACAGTTGCAAGCCTTTGATTGCGCCTAAGAAAAAATCCATCAATTGGTTGTTTTTATTGCTCGGACAATTTCTTGGATGTTGCACTCTCAAGCAACTTAAGTATTTCTGTAAGCATAATGATTGTCATCGTACAGGAGCCAAAGATCGTGTGCTTTATCTTGCTTATCTTGCTTTGTTGAAACAACTTCATCCCGAGGGTCCGTTTGATTATCATCACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_369022.p1 GENE.R_Transcript_369022~~R_Transcript_369022.p1 ORF type:complete len:250 (+),score=13.96 R_Transcript_369022:1040-1789(+)
MMNNNNQNVNRKRKINSMIDDLNVGLTLETPSIFISTNSSQSYPSSQNYLNLSNSEISYPQPQPQPQPPAPTRARRNPTRGVAKSETITPPFPWATDRRAKVYSVKFLTEREIHVISGEVQCKKCEKSFTLEFNVEEKFKEVACFLLNNQSTMHERAPPQWISPSLVNCRFCGQINSCKPLIAPKKKSINWLFLLLGQFLGCCTLKQLKYFCKHNDCHRTGAKDRVLYLAYLALLKQLHPEGPFDYHHT*

Click here to download the sequence:
Link to NCBI Protein BLAST