Transcript Information: R_Transcript_369371.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value7E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.095565240600622
Replicate 20.21985654886176
Replicate 30.11993056333064
Condition 2: 8 Hour
Replicate 10.12819824579709
Replicate 20.11707267979678
Replicate 30.095034610577942
Condition 3: 24 Hour
Replicate 10.12019794360055
Replicate 20.23094511927306
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_369371.p1 GENE.R_Transcript_369371~~R_Transcript_369371.p1 ORF type:5prime_partial len:191 (+),score=29.69,PIF1|PF05970.10|3.4e-46 R_Transcript_369371:1-573(+)
GGTGAAGTTGGTGATGATGATGATGGTACGGCTGAATTTGAGGTCCCTGCTGATTTACTGATCAGTTCAAATGTTGAAGATCCAATTGCTACCATTGTTGAGACTACCTATCCGAACTTATTGGGAAATTTGAATGATTCTGTTTATTTTCAGCAAAGGGCAATATTAGGTCCAACTAATGAGGTTGTTGATGATATCAACTCATATATGTTATCGTTATTATCTGGGCAAGAAGAAATATATAGAAGTTGTGATCAAGTTTGTCCCGATGATGTTAAGAGCTTTGCAGATGATGAAATATACTCAACGGAGTACCTAAATAGTTTACAGTGCTTTGGTTTGCCGAACCATGAACTAATGTTGAAGGTAGGTGCTCCAATCATGTTGCTCAGAAACATTGATTGTTCAGGTGGTTTATGCAACGGTACACGATTACGTTTAACCAAGTTGGGTCACAATGTTATAGAAGCAGAGGTCCTTACTGGTAGAAAGATTGCAAACAAGGTATTCATACGTCGATTTTCATTGACGTCATCAGATTCACATCTATCGATCAAGTTTAGTAGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_369371.p1 GENE.R_Transcript_369371~~R_Transcript_369371.p1 ORF type:5prime_partial len:191 (+),score=29.69,PIF1|PF05970.10|3.4e-46 R_Transcript_369371:1-573(+)
GEVGDDDDGTAEFEVPADLLISSNVEDPIATIVETTYPNLLGNLNDSVYFQQRAILGPTNEVVDDINSYMLSLLSGQEEIYRSCDQVCPDDVKSFADDEIYSTEYLNSLQCFGLPNHELMLKVGAPIMLLRNIDCSGGLCNGTRLRLTKLGHNVIEAEVLTGRKIANKVFIRRFSLTSSDSHLSIKFSRR*

Click here to download the sequence:
Link to NCBI Protein BLAST