Transcript Information: R_Transcript_371071.p1


Annotated TAIR IDAT2G47110.1
Annotated Gene Nameubiquitin 6
Annotated Gene Symbol(s)UBQ6
Annotation TypeOrtholog
Chromosome Positionchr2:19344701-19345174 | Forward length=157
E-Value1.1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0667314843667
Replicate 20.81803767855707
Replicate 32.231175739885
Condition 2: 8 Hour
Replicate 10.15899912303406
Replicate 20.87120318861762
Replicate 30.23573520286217
Condition 3: 24 Hour
Replicate 10.59630668123907
Replicate 20.71607983410965
Replicate 30.99489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371071.p1 GENE.R_Transcript_371071~~R_Transcript_371071.p1 ORF type:5prime_partial len:154 (+),score=18.63,Ribosomal_S27|PF01599.15|3e-22,Ribosomal_S27|PF01599.15|0.00028,ubiquitin|PF00240.19|9.8e-26,Rad60-SLD|PF11976.4|2.8e-10,Rad60-SLD|PF11976.4|2.4e+03 R_Transcript_371071:3-464(+)
GGAAGTGATTCCATCCAACAAGTCAAACAAAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAGCAACGACTTATCTTCGCTGGTAAACAACTCGAAGATGGAAGAACTCTTGCTGACTACAATATCCAAAAAGAATCTACTCTCCACTTAGTTCTTAGACTTCTTGGTGCTGGTAAAAAGCGAAAGAAGAAGACTTATACCAAACCAAAAAAACAAAAGCACAAGAAGAAGAAGGTCAAGTTAGCTGTTCTCAAATACTACAAAGTTGACCCCAAAACCAACAAAGTTCAAAGATTGAGAACTGAATGTAACGCTCCAGAATGTGGAGCTGGTATCTTCTTCGCCAACATGTTTGACCGAAAATACTGCGGAAAATGCCACCTCACTTTAATTAACAACATGTTTGACCGAAAATACTGCGGAAAATGCCACCTCACTTTAATTAACAACAAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371071.p1 GENE.R_Transcript_371071~~R_Transcript_371071.p1 ORF type:5prime_partial len:154 (+),score=18.63,Ribosomal_S27|PF01599.15|3e-22,Ribosomal_S27|PF01599.15|0.00028,ubiquitin|PF00240.19|9.8e-26,Rad60-SLD|PF11976.4|2.8e-10,Rad60-SLD|PF11976.4|2.4e+03 R_Transcript_371071:3-464(+)
GSDSIQQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLLGAGKKRKKKTYTKPKKQKHKKKKVKLAVLKYYKVDPKTNKVQRLRTECNAPECGAGIFFANMFDRKYCGKCHLTLINNMFDRKYCGKCHLTLINNKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST