Transcript Information: R_Transcript_371288.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.48224710728742
Condition 2: 8 Hour
Replicate 10.25774594681311
Replicate 20
Replicate 30.38213917095551
Condition 3: 24 Hour
Replicate 10.72498338613802
Replicate 20
Replicate 30.69119067432307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371288.p1 GENE.R_Transcript_371288~~R_Transcript_371288.p1 ORF type:internal len:95 (+),score=30.69 R_Transcript_371288:2-283(+)
GTAAGTTGTGAGTCTAGAGTGGATAGTGGATCAGAAGCAGCTGCTCCTGGTGAAAAGGAGCTTTTGTCTTCTGCTGGTGATTTTGCAACAGAAACCTCGTCAGCAGATAATTCAGGATCTAATGGCTCCAATATTGTGAACTCGTTTGATCAGTCAATGGACGATAGTGCTGCTTCCAGCAGTGGATCTCCATGGTATGAGTTGCAAAGAGATGCTACAGCTCTTGTTTCACAGTCTCTACAGAGGGGACGCAAAAATCTTTGGCAGCTTACAACAAGTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371288.p1 GENE.R_Transcript_371288~~R_Transcript_371288.p1 ORF type:internal len:95 (+),score=30.69 R_Transcript_371288:2-283(+)
VSCESRVDSGSEAAAPGEKELLSSAGDFATETSSADNSGSNGSNIVNSFDQSMDDSAASSSGSPWYELQRDATALVSQSLQRGRKNLWQLTTSR

Click here to download the sequence:
Link to NCBI Protein BLAST