Transcript Information: R_Transcript_371512.p1


Annotated TAIR IDAT3G47520.1
Annotated Gene Namemalate dehydrogenase
Annotated Gene Symbol(s)MDH
Annotation TypeHomolog
Chromosome Positionchr3:17513657-17514868 | Forward length=403
E-Value9E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41083834946312
Replicate 20.067512219988097
Replicate 30.14731020962156
Condition 2: 8 Hour
Replicate 10.31493073887132
Replicate 20.21569982483459
Replicate 30.058365307461051
Condition 3: 24 Hour
Replicate 10.51673521091295
Replicate 20.28366892463765
Replicate 30.63340624495844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371512.p1 GENE.R_Transcript_371512~~R_Transcript_371512.p1 ORF type:5prime_partial len:311 (+),score=56.66,Ldh_1_N|PF00056.19|4e-48,Ldh_1_C|PF02866.14|5e-47 R_Transcript_371512:3-935(+)
AAAGTTGCTGTTCTCGGAGCTGCTGGTGGTATTGGTCAACCCCTCTCACTCCTCCTTAAAAACTCCCCATTAGTCTCAGATCTCAGTCTTTATGATATTGTAAATACACCCGGTGTCGCTGCTGATCTCAGTCACATCTCTACCCCCGCAAAAGTGAGTGGTTACAACAAAGAACAACTTGGTGATGCCTTAAAAGGATCAAAAGTTGTTGTCATCCCCGCTGGTGTTCCAAGAAAACCAGGAATGACCCGAGACGACCTTTTCAACACCAACGCTTCAATCGTCAAAACCCTCGCTGAAGCAGTCGGAACTCACTGCCCAGAAGCTGCTGTTCTCATTATCTCAAATCCAGTCAACTCAACTGTCCCAATCGTTGCAGAAACTCTCAAAAAACAAGGTGTTTATGATCCAAGAAAACTCTTTGGTGTTACTACCTTGGACATTACCCGAGCAAAAACTTTTGTTGCAGAAGCAAAAGGCGCCAATGTCTTCACTCTTGACATCCCAGTTGTTGGTGGACATGCCGGAAAAACTATTCTCCCATTACTTTCTCAAAACAACGCCAACTTAACCTTCACTGAAGAAGAGCTCAAATCATTAACTCACCGAATTCAATTCGGAGGTGATGAAGTTGTTCAAGCCAAGAATGGAGCTGGATCTGCTACTTTATCAATGGCCTATGCTGGTGCTCACTTCACCTTCTCCGTCTTAAGAGCATTATCCGGTGAAAAAGGAGTTGTTGAATGCACATTTGTTGAATCAAATGTTACTTCTCTTCCATTCTTCAGTTCTCGAGTTGAACTTGGTGTCAACGGTGTTGAAAAGATCCACGGACTCGGAAATTTGACTGCCTTTGAAGAAGAAGGACTCAAAGTTGCTATCCCCGAATTGGAGGCTAGTATTGCTAAAGGTGTTAAATTCGCCAACGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371512.p1 GENE.R_Transcript_371512~~R_Transcript_371512.p1 ORF type:5prime_partial len:311 (+),score=56.66,Ldh_1_N|PF00056.19|4e-48,Ldh_1_C|PF02866.14|5e-47 R_Transcript_371512:3-935(+)
KVAVLGAAGGIGQPLSLLLKNSPLVSDLSLYDIVNTPGVAADLSHISTPAKVSGYNKEQLGDALKGSKVVVIPAGVPRKPGMTRDDLFNTNASIVKTLAEAVGTHCPEAAVLIISNPVNSTVPIVAETLKKQGVYDPRKLFGVTTLDITRAKTFVAEAKGANVFTLDIPVVGGHAGKTILPLLSQNNANLTFTEEELKSLTHRIQFGGDEVVQAKNGAGSATLSMAYAGAHFTFSVLRALSGEKGVVECTFVESNVTSLPFFSSRVELGVNGVEKIHGLGNLTAFEEEGLKVAIPELEASIAKGVKFANA*

Click here to download the sequence:
Link to NCBI Protein BLAST