Transcript Information: R_Transcript_371734.p1


Annotated TAIR IDAT5G11170.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3553334-3556646 | Forward length=427
E-Value1.2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.12633266576941
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.24731869702709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371734.p1 GENE.R_Transcript_371734~~R_Transcript_371734.p1 ORF type:5prime_partial len:177 (+),score=2.10,Helicase_C|PF00271.27|1.6e-22 R_Transcript_371734:3-533(+)
CAAGTTCTGATGTTCACTGCTACACTTAGTGCTGAAATTCGCCCAATTTGCAAAAAATTCATGAACAACCCCTTGGAAATCTTAGTCAATGAAGGTGCAAAATTGACTTTACACGGTCTCCAACAATACTATCTCCGCATCAACGAAGAAAACAAGAACAAGAAACTCATTTCAATTCTTGATGCTATCCAATTCAACCAAGTCGTTATCTTCGTTAAATCAGTGCGCAGAGCGAAGGTCCTTTGCGCTCTTCTTAACGAACAGAAATTTCCAACTCTCACTATTCACAGTGACATGGACCAAACCGAAAGAATCAAAGAATACGAGAATTTCAAAGATTTCAAGAAAAGAATTTTAGTTTCCACCGATTTAGTTGGACGAGGAATTGATATTGCCAAAGTCAATGTTGTAATTAACTACGACATGGCCCCTTCGGCTGATAATTACTTGCATCGAGTCTGTTCTCTCAAATCCACCCAATCATACCTGCTTATCACTCACACTTTTCCCATTTGTCTAAACAAACTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371734.p1 GENE.R_Transcript_371734~~R_Transcript_371734.p1 ORF type:5prime_partial len:177 (+),score=2.10,Helicase_C|PF00271.27|1.6e-22 R_Transcript_371734:3-533(+)
QVLMFTATLSAEIRPICKKFMNNPLEILVNEGAKLTLHGLQQYYLRINEENKNKKLISILDAIQFNQVVIFVKSVRRAKVLCALLNEQKFPTLTIHSDMDQTERIKEYENFKDFKKRILVSTDLVGRGIDIAKVNVVINYDMAPSADNYLHRVCSLKSTQSYLLITHTFPICLNKL*

Click here to download the sequence:
Link to NCBI Protein BLAST