Transcript Information: R_Transcript_371825.p1


Annotated TAIR IDAT1G66170.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)MMD1
Annotation TypeOrtholog
Chromosome Positionchr1:24638793-24641222 | Reverse length=704
E-Value3.1E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77179538920587
Replicate 20.48828605619298
Replicate 30.62957206923886
Condition 2: 8 Hour
Replicate 10.46590440703003
Replicate 20.33092214141289
Replicate 30.84426095908777
Condition 3: 24 Hour
Replicate 10.53390249366754
Replicate 20.8393121776541
Replicate 30.64783903935848


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371825.p1 GENE.R_Transcript_371825~~R_Transcript_371825.p1 ORF type:complete len:473 (+),score=70.15 R_Transcript_371825:1030-2448(+)
ATGTCTCTACCCATATTGAAAACCTGCAGGAAGAAGAAGTCCCCCAAACTCTATGGATTCCACACATTCTTTGATCATCCGGGCAACCCCATTAATCCAATTGGACCATTTCGTGATAATATTCGGGCCTTCCTTCGAGAATGTGCTGAGATTGAAGACTACAAAGTCAATTCCATGCCCGTTTGGTGTACTTTGCTTGTCCTTGAAAACAGGGGCATCGTTGTTCCTCTTTACACCTTTGAAGAAAATGTGATGGATTCCCAGAACCCTTTCTGTGATCACTGCCGTTGCGCTGGATGGAGTCATCATTATATGTCAAAAAGGAAGTACCATGTGATCATACCGCTTGATTCTGAGTGGAATAAACCTATCAACAGTGATGTTTTTGAGACTCAGACCCACCTCTTGTATGGGCTCATTCATTGTAATGGCTTCGGCCATCTTCTGTGCATCAATGGGATTGAAGGAGGTTCTACGTATCTTTGTGGAAGAGAGATCATGGATCTATGGGATCGTATCTGCACTAATCTTCATGCAAGAAAGATTATGGTAGGGGATTTGTCAAGAAAGAGTTCAATGGATCTCCGATTGCTTTATGGCATTGCATATGGTCACCCTTGGTTTGGCAGATGGGGATACAAGTTCTCACATGGAAGCTTTGGAGTTCAAGAGCACCATTACCAAAAAGCTGTGGAGGTTCTTAGCTCTCTAGATCTTGATGACCTGGTTTTCATGCTGCCAAAGATAGAACAAAGGCAAGTTATCAAGCATATCATATCTTCCTACCGAGATTTGAGTGAGACTTACCTCATCACACTCAGAGATCTCCTCAGGTTTATGCTCAACCTGAAGTCCCAGACTCCTGCCAGAACTAAAATGGCCTTGGCTGAGGCCTCATTGCCTACCTCCTTACCTTCGAAATACTCGTCCAAAATAACCCTGCAACACAGGAAGTCTCCTGCCAAAGCAAAACCTACAAAGTGCAAAAAATTTGCATCTCTGGCAGCTAACATGGACAGCAGATGGCCGACTAGGAGACTAGAATTTGCAGCTGATATAATTGTTAATGTCTTGAAGGAAAATAAGGAGACCAAACCTTTCCATATTGGAATGACTAGGCAAGAAGTTCGAGATGCTGCTCGACTTCATATTGGAGATACAGGGCTTCTTGATTATGTCCTGAAATCCATGAACAATGTGATTGTCAGAAATTCCATAGTTCGACGAAGAATTAACCCTGTAAATAGGGTTCTGGAGTACACCATTCACCAACTTGGTGAACCTTCACCAAGAGAGCCAAAGCGAGAAAATGCCCCTGTTGAACATGAAACCCTATCACTTACTAAACAACCTGGAGTAGATGTTTATCAAGATGTATACACCTTGTACCTACAGCTACTCTTGGTGCAGTCCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371825.p1 GENE.R_Transcript_371825~~R_Transcript_371825.p1 ORF type:complete len:473 (+),score=70.15 R_Transcript_371825:1030-2448(+)
MSLPILKTCRKKKSPKLYGFHTFFDHPGNPINPIGPFRDNIRAFLRECAEIEDYKVNSMPVWCTLLVLENRGIVVPLYTFEENVMDSQNPFCDHCRCAGWSHHYMSKRKYHVIIPLDSEWNKPINSDVFETQTHLLYGLIHCNGFGHLLCINGIEGGSTYLCGREIMDLWDRICTNLHARKIMVGDLSRKSSMDLRLLYGIAYGHPWFGRWGYKFSHGSFGVQEHHYQKAVEVLSSLDLDDLVFMLPKIEQRQVIKHIISSYRDLSETYLITLRDLLRFMLNLKSQTPARTKMALAEASLPTSLPSKYSSKITLQHRKSPAKAKPTKCKKFASLAANMDSRWPTRRLEFAADIIVNVLKENKETKPFHIGMTRQEVRDAARLHIGDTGLLDYVLKSMNNVIVRNSIVRRRINPVNRVLEYTIHQLGEPSPREPKRENAPVEHETLSLTKQPGVDVYQDVYTLYLQLLLVQSM*

Click here to download the sequence:
Link to NCBI Protein BLAST