Transcript Information: R_Transcript_371868.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.10658020515887
Replicate 30.23255571163607
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.34961127757925
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371868.p1 GENE.R_Transcript_371868~~R_Transcript_371868.p1 ORF type:5prime_partial len:197 (+),score=18.65,ATG27|PF09451.6|6e-10,Man-6-P_recep|PF02157.11|1.4e-07 R_Transcript_371868:3-593(+)
GGCTACTATACTGCAACCTCTGGTAGTGATACATTTTACTGGAATATTTGTGGAACTGTCAGTGACTATTGCACTACGAAACCTAATTGCGCTGTTTGTCAAAGTTCAGGTGGAACCCAATACAGTTGTGGACAATACTCTGCCACAACAACAACTATCACCGAACTCAATGGTAATGTCACTATAATCTATACTGGTGGTGATATCTGCACTGGACAACAAAATCAACCTTCACGACAAACTACCATCAACGTTCTTTGTGGAGACTCGGATACTAACACAGTTGTTGAACAAACTTGTGCTTACCTCATTACAATGACAAACGAAGATGCATGCAGCGGATCTGGTGGATCTGGCACAAAAGTTGGATGGGTTGGTCTCAGTATCATGATTGCTGTTATTCTCTTATTCATTGTATACTTGGTTGTTGGAGTTATTGTAAAATGGAAGAAATACGAAGCCACCGGTATCGATTTAATCCCTAACCTTGATTTCTGGAAAGATGTTCCTTTCTTATTCAGAGATGGATGGATTTTCACAATCCAAAAAGTCACTTGTGGAAAAGTTTGTGGAGGATATTCTTCAATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371868.p1 GENE.R_Transcript_371868~~R_Transcript_371868.p1 ORF type:5prime_partial len:197 (+),score=18.65,ATG27|PF09451.6|6e-10,Man-6-P_recep|PF02157.11|1.4e-07 R_Transcript_371868:3-593(+)
GYYTATSGSDTFYWNICGTVSDYCTTKPNCAVCQSSGGTQYSCGQYSATTTTITELNGNVTIIYTGGDICTGQQNQPSRQTTINVLCGDSDTNTVVEQTCAYLITMTNEDACSGSGGSGTKVGWVGLSIMIAVILLFIVYLVVGVIVKWKKYEATGIDLIPNLDFWKDVPFLFRDGWIFTIQKVTCGKVCGGYSSI*

Click here to download the sequence:
Link to NCBI Protein BLAST