Transcript Information: R_Transcript_371869.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0296542077021
Replicate 20.43069334187278
Replicate 30.35241134763311
Condition 2: 8 Hour
Replicate 10
Replicate 20.45868475571663
Replicate 30.093085182668651
Condition 3: 24 Hour
Replicate 10.35319703427237
Replicate 20.11310389174655
Replicate 30.33673391825996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_371869.p1 GENE.R_Transcript_371869~~R_Transcript_371869.p1 ORF type:5prime_partial len:195 (+),score=16.98,ATG27|PF09451.6|1.4e+02,ATG27|PF09451.6|6.5e-12,Man-6-P_recep|PF02157.11|5.8e-09 R_Transcript_371869:3-587(+)
GGCTACTATACTGCAACCTCTGGTAGTGATACATTTTACTGGAATATTTGTGGAACTGTCAGTGACTATTGCACTACGAAACCTAATTGCGCTGTTTGTCAAAGTTCAGGTGGAACCCAATACAGTTGTGGACAATACTCTGCCACAACAACAACTATCACCGAACTCAATGGTAATGTCACTATAATCTATACTGGTGGTGATACCTGCTCCAATCAACCAAATCAACCTGCACGACAAACTACTATCATAGTTGACTGCAGTGGAGAAACCGATAACTCAGTTACTGAACAAACTTGTGCTTACACCATTACAATGATAAGCGATACGTGCAGTGGATCTAGTTCTGGTCCTGGAGTTGGATGGGTTGGTCTCAGTATCATGATTGCTGTTATTCTCTTATTCATTGTATACTTGGTTGTTGGAGTTATTGTAAAATGGAAGAAATACGAAGCCACCGGTATCGATTTAATCCCTAACCTTGATTTCTGGAAAGATGTTCCTTTCTTATTCAGAGATGGATGGATTTTCACAATCCAAAAAGTCACTTGTGGAAAAGTTTGTGGAGGATATTCTTCAATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_371869.p1 GENE.R_Transcript_371869~~R_Transcript_371869.p1 ORF type:5prime_partial len:195 (+),score=16.98,ATG27|PF09451.6|1.4e+02,ATG27|PF09451.6|6.5e-12,Man-6-P_recep|PF02157.11|5.8e-09 R_Transcript_371869:3-587(+)
GYYTATSGSDTFYWNICGTVSDYCTTKPNCAVCQSSGGTQYSCGQYSATTTTITELNGNVTIIYTGGDTCSNQPNQPARQTTIIVDCSGETDNSVTEQTCAYTITMISDTCSGSSSGPGVGWVGLSIMIAVILLFIVYLVVGVIVKWKKYEATGIDLIPNLDFWKDVPFLFRDGWIFTIQKVTCGKVCGGYSSI*

Click here to download the sequence:
Link to NCBI Protein BLAST