Transcript Information: R_Transcript_372178.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.09743573463373
Replicate 20.037359965153555
Replicate 30.16303727826443
Condition 2: 8 Hour
Replicate 10.043569154710401
Replicate 20.15915218392303
Replicate 30.096894718614165
Condition 3: 24 Hour
Replicate 10.16340076318651
Replicate 20.039244232901383
Replicate 30.15578437499571


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_372178.p1 GENE.R_Transcript_372178~~R_Transcript_372178.p1 ORF type:internal len:562 (+),score=54.84,RVT_1|PF00078.23|3.9e-23,zf-RVT|PF13966.2|6.2e-18 R_Transcript_372178:3-1685(+)
GGAAAAGGGTTTATGGCTATTAAGATTGACCTTGCCAAAGCCTATGATAGGCTCCGATGGGAGTTTATTAAGGACACCTTAATGGATATGAAACTTCCTATCAAGCTCATTGACATCATCATGCTTTGTGTTTCAACGCCTACTATGCAAGTGCTCTGGAATGGGGAACCTTCGGCGAAATTCACTCCATCTAGAGGCATTCGTCAAGGTGACCCTCTCTCGCCGTACCTTTTCGTTATGTGTATGGAGAGACTCCACCATCTCATTGAGGACACTATTCGATGTGGTTTCTGGAAGCCAATACGGTGTAGTAGGCAGGGACCCCAACTTTCTAATTTATTCTTTGCTGATGATGTTGTCTTCTTTGCTGAGGCTTCGGTGGAGCAGGCTTTGGTAATCAAGCATTGTTTAGATCGTTTTTGCAGAGCCTCGGGGGAGCTAGTATCATTCCCCAAATCCCGTATCCATTTTTCAAGAAATGTGGAACCTGAGCTTTCTTCAACTATAAGTGAGGCTCTAGGCATCGCAAGTACTGAGGACTTGGGCTTCTACTTGGGAATGCCCACTATCAATGGTAGAGTGACGAAAATGACTTTTGAATATATTGTGCAGCGCATGGAGGCACGACTGAATGGATGGAAAGCTAAATCCCTCTCGCTAGCAGGAAGGTGCACTCTCACAAAATCAATCCTCTCTTCAATGGCCACTTATGCTATGCAATCATCCCGCATCCCCAGGGCTATATGTGATGATCTCGACAGGAAATCACGTCGATTCCTATGGGGAGGCAGTGAAGATCAACGAAAAGTCCACCTAGTCTCTTGGGATAAGGTCCAGCAATCCTGCTGTGAGGGGGGACTTGGTATTAGATCCATGCGCCAAGTTAACGCTGGGTTCATGACGAAACTTGGGTGGCGTTTGTTAACTGAACCTTCCTCATTATGGTCAAGAATTCTGCGGGATAAGTACTGTAGTGGCAGATGTGACCTGGACATGTTCACGAGGGTCGCGAACTCTTCCAATGCATGGCAGGGTATAGTGGAGCAAGCTGAAACTATACGTAAAGGGGCTCGGATGGAGATAGGAAACGGGCAACGCACCCTCTTTTGGGATCATAGGTGGGCCCTTGACATCCCTTTATCCTCGGTGGCCATCAGGGAAATCCCACTAGAGCATCAAGATCGCACGGTGGAGGAATATTGGGACCCCAATGGAGATTGGAAGTGGGAGGAGTTCACGGACCTACTACCTCAGGAGATCATTAAGGCCTTAATCCCAATCTCAGTAATACAAGGTGAAGAAGATGTGTTTTACTGGGGTGGTTCCGAGAATGGGCAATTCTCCCTCAAATCTGCCCTCAAGCTGGTTCGTGATGTACCTGTAGTACAACATAATAAGTCTTGGGATCTCATTTGGAGAGTGCCATTTTCTCAACGAATCAGAATGTTCCTCTGGTTAGTAATGCATCAACGCCTCCTCACCAATGCCAACAGGGTAGCGCGTTGTTTGGCGGAGGACCCCAGGTGTAGTAGCTGTGGGGACAATGAAGAGACAGTTGATCATGTCCTGAGGACTTGCCCTTATGCCATGGCAGTCTGGGAACGCCTCAGTACGGGCCCTATCCCAGCGGATTTTTGGACCCAGCCAGTGGATGTATGGTTGGTTGAGAACATCGATATTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_372178.p1 GENE.R_Transcript_372178~~R_Transcript_372178.p1 ORF type:internal len:562 (+),score=54.84,RVT_1|PF00078.23|3.9e-23,zf-RVT|PF13966.2|6.2e-18 R_Transcript_372178:3-1685(+)
GKGFMAIKIDLAKAYDRLRWEFIKDTLMDMKLPIKLIDIIMLCVSTPTMQVLWNGEPSAKFTPSRGIRQGDPLSPYLFVMCMERLHHLIEDTIRCGFWKPIRCSRQGPQLSNLFFADDVVFFAEASVEQALVIKHCLDRFCRASGELVSFPKSRIHFSRNVEPELSSTISEALGIASTEDLGFYLGMPTINGRVTKMTFEYIVQRMEARLNGWKAKSLSLAGRCTLTKSILSSMATYAMQSSRIPRAICDDLDRKSRRFLWGGSEDQRKVHLVSWDKVQQSCCEGGLGIRSMRQVNAGFMTKLGWRLLTEPSSLWSRILRDKYCSGRCDLDMFTRVANSSNAWQGIVEQAETIRKGARMEIGNGQRTLFWDHRWALDIPLSSVAIREIPLEHQDRTVEEYWDPNGDWKWEEFTDLLPQEIIKALIPISVIQGEEDVFYWGGSENGQFSLKSALKLVRDVPVVQHNKSWDLIWRVPFSQRIRMFLWLVMHQRLLTNANRVARCLAEDPRCSSCGDNEETVDHVLRTCPYAMAVWERLSTGPIPADFWTQPVDVWLVENIDIN

Click here to download the sequence:
Link to NCBI Protein BLAST