Transcript Information: R_Transcript_37280.p1


Annotated TAIR IDAT1G60800.1
Annotated Gene NameNSP-interacting kinase 3
Annotated Gene Symbol(s)NIK3
Annotation TypeOrtholog
Chromosome Positionchr1:22383601-22386931 | Reverse length=632
E-Value5.4E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.44892017788
Replicate 212.135476387402
Replicate 317.60036030897
Condition 2: 8 Hour
Replicate 115.949508360132
Replicate 218.822118430539
Replicate 326.436405376022
Condition 3: 24 Hour
Replicate 129.013192161617
Replicate 219.424815169683
Replicate 332.379746612497


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37280.p1 GENE.R_Transcript_37280~~R_Transcript_37280.p1 ORF type:3prime_partial len:436 (+),score=74.86,Pkinase|PF00069.21|2e-23,Pkinase_Tyr|PF07714.13|2e-21,LRRNT_2|PF08263.8|1.1e-11,LRR_8|PF13855.2|0.00046,LRR_8|PF13855.2|0.00014,LRR_4|PF12799.3|26,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|3e+02 R_Transcript_37280:560-1864(+)
ATGGAGAGAATGGTTTGCCTAACAGGATTGGTGTTCTTCATTTTGGTGGGGGCTGTTTCTGCTACACTCTCACCTACTGGAGTCAATTATGAAGTTGTTGCCTTGATGGGCATAAAAAATGAGCTGAAGGATCCATATAATGTTCTTGAGAATTGGGACATCAACTCTGTAGATCCTTGTAGCTGGAGGATGATTACTTGCTCTTCAGATGGCTATGTTTCTGCTCTGGGACTGCCTAGTCAAAGTTTATCTGGGAAATTATCTCCTGCAATTCAGAACCTCACCAAGTTGGAATCAGTCTTGTTGCAAAACAATGCCATATCTGGTCCTATTCCTGCTGAGATTGGGGGGTTGGATATGCTTCAGACTTTGGATCTTTCAAACAATGAATTCAGTGGAGAAATTCCCAGTTCTTTAGGAGATTTGAAGAACCTAAACTATCTGCGACTCAATAACAATAGCCTTACTGGACGTTGCCCAGATACCCTCTCAAAAATTGAAGGTTTAACTCTTGTGGACCTTTCATTCAACAATTTAAGTGGTTCCTTGCCGAAGATATCTGCCAGAACCTTCAAGATAATTGGTAACCCTTTGATTTGTGGAACAAGTTCTGCTACCAACTGTTCTGTGGCATCACCTGAGCCACTTTCCTTCCCCCCAGATTCTCTTAGAGCTGAACCCAATTCTGGAGGAAGAGGACACCATTTTGCTATAGCTTTTGGAGCAAGCTTTGGTGCTGCTCTTTTATCCCTGATTATCATTGGTTTGGTTGTTTGGTGGTGTTATGGGCGCAACCGACAGATTTTCTTTGATGTGAATGAGCAATATGACCCGGAGGTATGCCTTGGCCATCTGAAGAGATATAGTTTCAAAGAGCTGCGCTCTGCAACAGACCATTTTAACTCAAAGAATATACTTGGAAGAGGTGGATTTGGTATAGTATACAAAGGTTCCCTAAATGATGGGACGTTGGTAGCAGTTAAACGGTTGAAGGATTATACTATAACTGCAGGAGAAATTCAGTTTCAGACAGAAGTTGAGACTATCAGTTTGGCTGTCCATCGGAATCTTCTCCGGCTATGTGGTTTCTGTTCTACAGAGAACGAACGACTCCTTGTCTATCCGTATATGCCCAACGGAAGTGTGGCGTCTCGCCTCAAAGATCACATTTATGGAAGACCAGTTTTAGACTGGTCAAGGCGTAGGAATATTGCTCTAGGCACAGCAAGGGGACTTCTGTATTTACATGAACAGTGCGACCCTAAAATTATTCACCGTGATGTGAAGGCAGCTAACATTCTGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37280.p1 GENE.R_Transcript_37280~~R_Transcript_37280.p1 ORF type:3prime_partial len:436 (+),score=74.86,Pkinase|PF00069.21|2e-23,Pkinase_Tyr|PF07714.13|2e-21,LRRNT_2|PF08263.8|1.1e-11,LRR_8|PF13855.2|0.00046,LRR_8|PF13855.2|0.00014,LRR_4|PF12799.3|26,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|3e+02 R_Transcript_37280:560-1864(+)
MERMVCLTGLVFFILVGAVSATLSPTGVNYEVVALMGIKNELKDPYNVLENWDINSVDPCSWRMITCSSDGYVSALGLPSQSLSGKLSPAIQNLTKLESVLLQNNAISGPIPAEIGGLDMLQTLDLSNNEFSGEIPSSLGDLKNLNYLRLNNNSLTGRCPDTLSKIEGLTLVDLSFNNLSGSLPKISARTFKIIGNPLICGTSSATNCSVASPEPLSFPPDSLRAEPNSGGRGHHFAIAFGASFGAALLSLIIIGLVVWWCYGRNRQIFFDVNEQYDPEVCLGHLKRYSFKELRSATDHFNSKNILGRGGFGIVYKGSLNDGTLVAVKRLKDYTITAGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIYGRPVLDWSRRRNIALGTARGLLYLHEQCDPKIIHRDVKAANILL

Click here to download the sequence:
Link to NCBI Protein BLAST