Transcript Information: R_Transcript_373397.p1


Annotated TAIR IDAT5G39150.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15670008-15670789 | Reverse length=221
E-Value5E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1783369040611
Replicate 20.69123622769706
Replicate 30.37706563944284
Condition 2: 8 Hour
Replicate 16.6504818375234
Replicate 210.950390695889
Replicate 313.370939510491
Condition 3: 24 Hour
Replicate 10.94476572953515
Replicate 21.089148587189
Replicate 30.45036429396908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_373397.p1 GENE.R_Transcript_373397~~R_Transcript_373397.p1 ORF type:complete len:243 (+),score=10.33,Cupin_1|PF00190.18|5.5e-41,Cupin_2|PF07883.7|2.7e-08 R_Transcript_373397:81-809(+)
ATGGCTCGGAAAATAGGAAGTTGTATGAGAATGTTGGTCATGATAGGTTGTTGCATGGTTTTTGCAATAAGCTTGACATGTTACGTTGCCAACGCCTCAGATCCTGGTCCTCTTCAGGATTTTTGTATCGGTGTAAAAGATCCTCAATCTGGTGTGTTTGTCAATGGTTTTTTCTGCAAGAACCCAAAGGACGTCACGTCGAATGATTTCTTATACAAAGGCTTCGACACAGTCGGAGACACAAACAACAAGCTAGGATCCAAGGTTGTACAGGTAAACTCGACAACATTCCCAACGATTAACACCTTGGGGGTGGCAATGGGTCGTGTAGACTTTGCACCAGGCGGTTTGAACCCTCCTCACTTACACCCTCGTTCATCCGAGATGCTCACCGTGATAGAAGGAACCCTATATGCCGGATTTATAAGCTCGAACCTGCAATCTGGGGGTAACAAGCTATATGCTAAGATTATTAACAAGGGTGATATATTTGTGTTCCCCCAAGGACTCATTCACTTCCAACTTAATCTTGGTAGCACACCCGCCGTGGCTAATGTCGCCTTTGGTAGCCAAACACCGGGACTTGTTACTATTGCTAGTGCCGTGTTTGGCTCTATGCCCCTTATTTCTGATGATGTTCTTACTAAGGGATTTCAAGTCGATGAGAAGGCAATTAAGGCTCTTCGCTCCCAATTTTGGTCCGACGAACAACTATCAAGCTACATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_373397.p1 GENE.R_Transcript_373397~~R_Transcript_373397.p1 ORF type:complete len:243 (+),score=10.33,Cupin_1|PF00190.18|5.5e-41,Cupin_2|PF07883.7|2.7e-08 R_Transcript_373397:81-809(+)
MARKIGSCMRMLVMIGCCMVFAISLTCYVANASDPGPLQDFCIGVKDPQSGVFVNGFFCKNPKDVTSNDFLYKGFDTVGDTNNKLGSKVVQVNSTTFPTINTLGVAMGRVDFAPGGLNPPHLHPRSSEMLTVIEGTLYAGFISSNLQSGGNKLYAKIINKGDIFVFPQGLIHFQLNLGSTPAVANVAFGSQTPGLVTIASAVFGSMPLISDDVLTKGFQVDEKAIKALRSQFWSDEQLSSYM*

Click here to download the sequence:
Link to NCBI Protein BLAST