Transcript Information: R_Transcript_374030.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18580796828582
Replicate 30
Condition 2: 8 Hour
Replicate 10.2166890703296
Replicate 20.39576782019798
Replicate 30.48190116691293
Condition 3: 24 Hour
Replicate 10.4063328712868
Replicate 20.1951792822175
Replicate 30.58108950496188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_374030.p1 GENE.R_Transcript_374030~~R_Transcript_374030.p1 ORF type:3prime_partial len:113 (+),score=28.97,KIP1|PF07765.8|3.1e+02,KIP1|PF07765.8|2.2e-10 R_Transcript_374030:47-382(+)
ATGTTCTACCCCGTACTGAGGCTAAATCTGTGTAAAAATGTCTCATCGGTTTGTATTGAAGGTGAAGCAAGTTTGAGGCGGAGAAGCGAAGTAAAGATGGGAAAGAAAAAGCATCATTTGAGGAGGTCACTGAAGTCATTTTTTCAGAAGCATGCTGATCCTGAGAAACATGAGAAGCTGAAAGAAAGCAGAAAAGATATGGAGGAGAAGAAGACAAAGATATTAAATCTCCTGGAAATCCATGATGAAAATGATGGAAACCAAATTCATGAATCAAAAAAAGGGCCCATCATGGAGCTCCTTGAGGAATTCCACAGACACTATGAATCACTTTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_374030.p1 GENE.R_Transcript_374030~~R_Transcript_374030.p1 ORF type:3prime_partial len:113 (+),score=28.97,KIP1|PF07765.8|3.1e+02,KIP1|PF07765.8|2.2e-10 R_Transcript_374030:47-382(+)
MFYPVLRLNLCKNVSSVCIEGEASLRRRSEVKMGKKKHHLRRSLKSFFQKHADPEKHEKLKESRKDMEEKKTKILNLLEIHDENDGNQIHESKKGPIMELLEEFHRHYESLF

Click here to download the sequence:
Link to NCBI Protein BLAST