Transcript Information: R_Transcript_37445.p1


Annotated TAIR IDAT5G57900.1
Annotated Gene NameSKP1 interacting partner 1
Annotated Gene Symbol(s)SKIP1
Annotation TypeOrtholog
Chromosome Positionchr5:23449916-23450915 | Reverse length=300
E-Value3.4E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.877178735216
Replicate 212.064540874127
Replicate 315.41659800122
Condition 2: 8 Hour
Replicate 112.825929258081
Replicate 215.68811075207
Replicate 318.612603905984
Condition 3: 24 Hour
Replicate 112.025518071654
Replicate 210.572520928499
Replicate 313.34107714249


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37445.p1 GENE.R_Transcript_37445~~R_Transcript_37445.p1 ORF type:5prime_partial len:315 (+),score=40.65,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.5e+02,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.081 R_Transcript_37445:2-946(+)
AAAAAAAAAAAAAAAATGAACGAACAAGAAAAGGCAATAACCGAGTTAACCCCTAGTTCAGACTGGGCTGAGTTAACTCACGAGTGTTTAATCAACATCTTATCGCGTCTTCCATTAGAGGACAGATGGAAAGGAGCTATGATGGTTTGCAAGCCATGGTTACAAGCATGCAAGGACCCTTCCCTCAATACTGTCCTTGATCTCGAACCCTACTTTGACTCGTCCACTGAGTCGACTCACTGGTGGTCTTCCGAGTTTGAGAGGAGAATTGATGCCATTCTCCGATCCGTGGCTGAGTCGAGTCACGGGTCTTTGATTGAGATCAGGGTCAGGCACTGCTCTAATAAAGCTCTCATTTTTGGTGCTCAAAGATGCCCTAAACTTCAGGTTCTTTCAATTAAAAGCAGCCAGAGTGTCTCTGACGCAGCCATGGCTGAGATAGCAAAGAGCTGTCCTGCGCTGAAAGAACTTGACATCAGCTTCTGCCATGAGATCTCTCATGAATCTCTGACTTTGATTGGCCGGAATTGTCCCGACCTTAAAGTACTTAGACGCAACTTCATGAATTGGTTAGACTCTTCCCAGCATAAAGGTGTTGTTCCGAATGAATACCTTGATGCATTGCCCCAAGATGGTGATTCTGAAGCTGCTGCCATTGGCAAATACATGCCTGGTCTGGATCACCTCGAGCTTCGATTCTCTAAGTTATCAGGCAAAGGCCTTGCCTTGATATCTCAAGGCTGTTTAAACCTGGAATATTTGGACCTATCTGGGTGTGCAAACTTGACTAGTCGTGATATTATCAATGCATCCTCGAATTTGAAGAACCTTAAGACGATCAAGAAGCCGAACTTCTACATCCCGAGGTCTGTCTATCACACTGAAAGGTATGGTCATTGGAGGTTGTATGATGAACGTTTTCAGACTGATGTCTTTAGGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37445.p1 GENE.R_Transcript_37445~~R_Transcript_37445.p1 ORF type:5prime_partial len:315 (+),score=40.65,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.5e+02,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.081 R_Transcript_37445:2-946(+)
KKKKKMNEQEKAITELTPSSDWAELTHECLINILSRLPLEDRWKGAMMVCKPWLQACKDPSLNTVLDLEPYFDSSTESTHWWSSEFERRIDAILRSVAESSHGSLIEIRVRHCSNKALIFGAQRCPKLQVLSIKSSQSVSDAAMAEIAKSCPALKELDISFCHEISHESLTLIGRNCPDLKVLRRNFMNWLDSSQHKGVVPNEYLDALPQDGDSEAAAIGKYMPGLDHLELRFSKLSGKGLALISQGCLNLEYLDLSGCANLTSRDIINASSNLKNLKTIKKPNFYIPRSVYHTERYGHWRLYDERFQTDVFRI*

Click here to download the sequence:
Link to NCBI Protein BLAST