Transcript Information: R_Transcript_37465.p1


Annotated TAIR IDAT3G46960.1
Annotated Gene NameRNA helicase, ATP-dependent, SK12/DOB1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17291004-17298067 | Reverse length=1347
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44291986991016
Replicate 20.16089119092949
Replicate 30.35106111258471
Condition 2: 8 Hour
Replicate 10.25017486536138
Replicate 20.59971713750306
Replicate 30.51000693952556
Condition 3: 24 Hour
Replicate 10.58640631488388
Replicate 20.42251453813367
Replicate 30.50316562498615


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37465.p1 GENE.R_Transcript_37465~~R_Transcript_37465.p1 ORF type:complete len:783 (+),score=177.25,DEAD|PF00270.25|9.6e-15 R_Transcript_37465:170-2518(+)
ATGGATCGATTACCAGCAGGAAACGAGTTATCATTTCGGGTCGGGCTAACGGGTCACAGCGGTCATCTCTACGTCGAACCCCTTCCCCCAATCGAAGGCGACGACAATCCTCTTCGTGACCTCCCGGATTTTGTTCTCCCACCTGCCTTTCCGAGGGAGACTAGAGAATCTATCATAGAATATATAGAAGAAAAGTATCTTACTCCTAAATTGGACCCTGATGAGTTCTCTGTTGAGAAGGCTGGAAGGGACTGGGATTTTGACTGGTTTGGCAAGGCCAAAATACCCATTGATCCATCATTACCTCGATCAGCTGTGGTTCCTGCTTGGGAATTACCATTTAGGCGTTCACATGGACAAGAGGATGCAATCTGGGAGCCCCAATCCGTGGAGGTAGAGATGTCAGAATTAACTGCCGGAGCAGAGGAATCTGGTGCTTTGCCGCGAATTACTGGACCTTCAAAGGATTTTGTCAGGGGGAGCATTAACAATCGGCCTTTTCGTCCAGGAGGTTTAGATGGATCTCAGTCTTTACCCAAGGTTGTTCCTGAGGGTGCTTTGAATGGTCAATGGATACACGAGGTTCTTAATGGTGGTCCTGCTGAAAAAATTCCTCCCAGCTTTAAGCAAGGATTGGATCTTGGTGATCTCAAGGCATTTCCTTGTTCGTGGAATGTTGCTAAGGGCCAAGTTTCTTCAACAGGTATATTGGATGAAGAGAAGAGCAAATTGTCTTTGCAGTTTGATGATTTGTTCAAGAGAGCATGGGAAGATGATTTTGCTGCAAGGGATGAGGCTGGCGAACATAAATCAGAAGTAGAGAACATTGAATCAGAAATCGAAGTGGTTAATGCTGAAGCCAACAAGGATATTCCAAATGTTAGATCATCTGAAATTGATGAAATTTTGTCAGTTGATTCAGTAGAACCAGAGTTGAAGATGGATGGAAAGAATGAGGAAGGTGGGAAGCAGCAAAAAGAGTCTTGGGCTATCCGTGGAGTTAATGAGCGTATTGCAGACCGTTTTTATGAACTTGTTCCTGACTTGGCACTAGAGTTTCCATTTGAATTGGATTCATTCCAAAAGGAGGCTATCTATTATCTTGAACAAGGGGAGTCTGTTTTTGTGGCAGCTCATACATCAGCTGGAAAGACAGTTGTTGCGGAGTACGCATTTGCATTGGCTTCAAAACATTGCACCAGAGCTGTATATACAGCTCCAATAAAGACAATCAGCAACCAAAAATACAGAGATTTCTCTGGGAAATTTGACGTGGGTCTTCTAACTGGCGATATCAGCTTGAGGCCAGAGGCGTCTTGTCTCATCATGACTACTGAGATATTGAGGTCAATGCTGTATAGAGGTGCTGATATTATCCGTGACATTGAATGGGTCATATTTGATGAAGTGCACTATGTTAATGACGCTGAAAGAGGTGTTGTTTGGGAGGAAGTTATTATAATGCTTCCACGTCACATCAATTTTGTTCTTCTTTCTGCCACAGTTCCAAATACAATAGAATTTGCTGACTGGATAGGTAGGACAAAGCAAAAGACTATTCGTGTTACTGGGACCACCAAAAGACCTGTCCCCTTGGAGCACTGCCTGTTTTACTCTGGAGAACTTTATAGGATTTGTGAGAATGAAATTTTTATACCTCAGGGTCTGAAAGCTGCTAAAGAAGCATACAAGAAAAAGAATTCCAGTACAGTCAGAAGTGGCCCTGCAATGGGTTCTGGTGGAGCTCATGCTCAAAATCGTGAACAAGCTCATCGTGGAAAACAGAAGCATCCTGTGTCCCATCATTCTGGAAATTTAAATGCGAATGCTTCGGGGAACTTTATGAATGGAAACCAGAATAATTTCAGCTTGAGACGATCTGATGCTTCTTTGTGGTTGCAATTAGTGAACAAACTGTCAAAAAAATCACTTTTGCCTGTTATCGTATTTTGTTTTTCAAAGAATCGTTGTGATCGATCAGCTGATAGTATGACAAGTATGGACCTTACAAGTAGTTCAGAGAAGAGTGAAATTCGCATTTTCTGTGACAAAGCCTTTTCACGTCTGAAGGGGTCTGATCGAAATCTACCTCAGATTCTTAGAGTTCAAAGTCTTCTTCGTAGAGGAATTGGTGTACATCACGCTGGTTTGCTCCCGATTGTGAAAGAAGTAATTGAAATGCTTTTCTGCCGTGGTGTAATCAATGTATGGACAGCTCTTCTTGATGTTATGGTGATATTGGGCTCAAGTTGCTGGTATGGTTTCATGGTACTCATGTGCTGTTTTCTACTGAGACATTTGCTATGGGGGTCAATGCTCCTGCCAGAACGGTGGTTTTTGATACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37465.p1 GENE.R_Transcript_37465~~R_Transcript_37465.p1 ORF type:complete len:783 (+),score=177.25,DEAD|PF00270.25|9.6e-15 R_Transcript_37465:170-2518(+)
MDRLPAGNELSFRVGLTGHSGHLYVEPLPPIEGDDNPLRDLPDFVLPPAFPRETRESIIEYIEEKYLTPKLDPDEFSVEKAGRDWDFDWFGKAKIPIDPSLPRSAVVPAWELPFRRSHGQEDAIWEPQSVEVEMSELTAGAEESGALPRITGPSKDFVRGSINNRPFRPGGLDGSQSLPKVVPEGALNGQWIHEVLNGGPAEKIPPSFKQGLDLGDLKAFPCSWNVAKGQVSSTGILDEEKSKLSLQFDDLFKRAWEDDFAARDEAGEHKSEVENIESEIEVVNAEANKDIPNVRSSEIDEILSVDSVEPELKMDGKNEEGGKQQKESWAIRGVNERIADRFYELVPDLALEFPFELDSFQKEAIYYLEQGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFSGKFDVGLLTGDISLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPRHINFVLLSATVPNTIEFADWIGRTKQKTIRVTGTTKRPVPLEHCLFYSGELYRICENEIFIPQGLKAAKEAYKKKNSSTVRSGPAMGSGGAHAQNREQAHRGKQKHPVSHHSGNLNANASGNFMNGNQNNFSLRRSDASLWLQLVNKLSKKSLLPVIVFCFSKNRCDRSADSMTSMDLTSSSEKSEIRIFCDKAFSRLKGSDRNLPQILRVQSLLRRGIGVHHAGLLPIVKEVIEMLFCRGVINVWTALLDVMVILGSSCWYGFMVLMCCFLLRHLLWGSMLLPERWFLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST