Transcript Information: R_Transcript_37475.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeOrtholog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.900541054935
Replicate 27.9166378618829
Replicate 39.8318039160833
Condition 2: 8 Hour
Replicate 16.6049799634149
Replicate 26.8648906993804
Replicate 38.6294542293643
Condition 3: 24 Hour
Replicate 113.172512343765
Replicate 211.931533498181
Replicate 312.6563776729


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37475.p1 GENE.R_Transcript_37475~~R_Transcript_37475.p1 ORF type:complete len:671 (+),score=99.62,WD40|PF00400.28|52,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|0.0035,WD40|PF00400.28|1.2,WD40|PF00400.28|0.0011,WD40|PF00400.28|59,WD40|PF00400.28|1.3e+03,zf-C3HC4_3|PF13920.2|5.2e-08,zf-C3HC4|PF00097.21|9.8e-08,zf-C3HC4_2|PF13923.2|1.2e-06,WD40_like|PF17005.1|3.9e+03,WD40_like|PF17005.1|2.5e+02,WD40_like|PF17005.1|5.3e-05 R_Transcript_37475:203-2215(+)
ATGGAGGAAACCTCAACTGGAGCTCTAGTGCCGGCGGTGAAATCGGAGCTCAAGTCGTTATCGACGATCATGACGACTCCGGGACCGGAATCTCTCGCCGTTGAATCGCCTTCTGACGGTGATAGAGATTTGATGTGTCCGATTTGTATGCAGTTCATTAAAGACGCTTTTCTAACAGCTTGTGGTCATAGTTTCTGTTATATGTGTATTATCACTCATCTTCGTAACAAGAATGATTGTCCTTGTTGTGGTCGTCATCTTACCAGTAATCAGCTCTTCCCTAATTTCCTCCTCGATAAGCTACTGAAGAAGGCATCAGCTCGTCAGGTGTCGAAAAGTGCGTCTCCGATTGAGCAGTTTCGTCGTGCCTTACAGCAGGGTTATGAAGTATCAGTCAAGGAGGTAGATACCCTTATGTCACTTCTTGCGGAGAAGAAGAGAAAGATGGAGCAAGAAGAGGCTGAGAGAAATATGCAGATTCTACTAGATTTCTTGCTATGTTTGAGAAAGCTGAAAGTCGATGAGCTCAGTGAGATTCAAACAGACCTCCAGTACATTAAGGAGGACATAAGCGCAGTGGAGAGGCATAGAATGGAGTTATATCGGGCAAGAGATAGGTATTCTGTAAAACTTCGAATGCTTGGTGATGATCCTACACCGAAATCATGGCCTTCAACAGTTGATAAGAGTAGTGGGGGCTTTTCCTCTGGTTCACGTAGCTCACTCGGAGGGTTGGCTGCAGGAAGTTTTCAGAACAAGAAGATGGATGGAAAGACTCAAGTAAACTCTCTTGGGCCCCCAAGAAAAGATGCTTTGTCCGGGTTGGACTCACAGTTCATTAGTCAGTCAGGTTTGGCTGTGATGAGGAAAAAAAGGATTCATGCACAGTTCAATGACCTGCAAGAATGTTACCTACAAAAGCGTCGTCAGTTGGCTAGTAAGCTTCCCGGACAGGATGAAAGGGATGGAAACTTTATGCAGAGGGAAGGCTTTAGTGAAGGTCTTGCCGAGTTTCAATCTGTATTATCTACCTTAACTCGTTACAGTCGATTGAGAGTCATAGCCGAACTTAGACATGGGGATCCTTTTCATTCAACCAATATTGTTTCGAGTATTGAATTTGACCGTGATGATGAGTTATTTGCTACTGCTGGAGTTTCCCGGAGAATTAAAGTTTTTGACTTTTCCTCGGTTGTCAATGAGCCGGCAGATTCCCACTGCCCTGTTGTTGAGATGTCTACCTTGTCCAAGCTCAGTTGCCTAAGCTGGAATAAGTTTACAAAGAACCAAATAGCTAGTAGTGATTATGAAGGAATAGTTACTGTATGGGATGTAACGACACGGCAGAGTGTGATGGAGTATGAAGAGCATGAGAAACGGGCGTGGAGTGTTGATTTTTCACGCACCGAACCTTCTATGCTTGTATCTGGCAGTGATGATTGTAAGGTAAAAGTGTGGTGCACAAGGCAGGAAGCTAGTGTGCTTAACATTGACATGAAGGCAAATATATGTTGCGTCAAGTACAATCCTGGGTCTAGCTACTATGTTGCGGTTGGTTCTGCAGATCATCACATCCATTACTATGATTTGAGGAACGCCAGCCAGCCAGTTCATGTATTTGGTGGGCATAAGAAGGCGGTTTCGTACGTCAAATTTTTGTCAACTAACGAGCTTGCTTCGGCATCAACAGACAGCACATTGAGACTGTGGGATGTGAAGGACAGCGTACCTGTCCGTACTCTCAGAGGCCATACTAACGAGAAGAATTTTGTAGGATTGACAGTGAACAGCGAATACATTGCCTGTGGCAGTGAAACAAATGAAGTTTTTGTGTATCATAAGGAGATCTCCAAACCTGTAACATGGCATAAATTTGGCTCACCCGATGTTGAGGATGCTGATGAGGATGCAGGATCCTACTTCATCAGTGCTGTATCCTGGAAGAGTGATAGCCCCACATTATTGACTGCCAACAGTCAAGGAACCATTAAGGTGCTAGTGCTTGCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37475.p1 GENE.R_Transcript_37475~~R_Transcript_37475.p1 ORF type:complete len:671 (+),score=99.62,WD40|PF00400.28|52,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|0.0035,WD40|PF00400.28|1.2,WD40|PF00400.28|0.0011,WD40|PF00400.28|59,WD40|PF00400.28|1.3e+03,zf-C3HC4_3|PF13920.2|5.2e-08,zf-C3HC4|PF00097.21|9.8e-08,zf-C3HC4_2|PF13923.2|1.2e-06,WD40_like|PF17005.1|3.9e+03,WD40_like|PF17005.1|2.5e+02,WD40_like|PF17005.1|5.3e-05 R_Transcript_37475:203-2215(+)
MEETSTGALVPAVKSELKSLSTIMTTPGPESLAVESPSDGDRDLMCPICMQFIKDAFLTACGHSFCYMCIITHLRNKNDCPCCGRHLTSNQLFPNFLLDKLLKKASARQVSKSASPIEQFRRALQQGYEVSVKEVDTLMSLLAEKKRKMEQEEAERNMQILLDFLLCLRKLKVDELSEIQTDLQYIKEDISAVERHRMELYRARDRYSVKLRMLGDDPTPKSWPSTVDKSSGGFSSGSRSSLGGLAAGSFQNKKMDGKTQVNSLGPPRKDALSGLDSQFISQSGLAVMRKKRIHAQFNDLQECYLQKRRQLASKLPGQDERDGNFMQREGFSEGLAEFQSVLSTLTRYSRLRVIAELRHGDPFHSTNIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEPADSHCPVVEMSTLSKLSCLSWNKFTKNQIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVLNIDMKANICCVKYNPGSSYYVAVGSADHHIHYYDLRNASQPVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKDSVPVRTLRGHTNEKNFVGLTVNSEYIACGSETNEVFVYHKEISKPVTWHKFGSPDVEDADEDAGSYFISAVSWKSDSPTLLTANSQGTIKVLVLAA*

Click here to download the sequence:
Link to NCBI Protein BLAST