Transcript Information: R_Transcript_374835.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value1.2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63673119609484
Replicate 21.7090011966754
Replicate 30.26635741390875
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.42213047954388
Condition 3: 24 Hour
Replicate 10.26695124683377
Replicate 20
Replicate 31.0180327761348


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_374835.p1 GENE.R_Transcript_374835~~R_Transcript_374835.p1 ORF type:5prime_partial len:86 (+),score=0.09 R_Transcript_374835:1-258(+)
CTCAGCACGACGGAGATACTCGGTGAATTTCTGAGTGATGGCTTCGCGAATCTTGGGGTTCTCCTCGTGCTTAAGATGAGCCTTGAAGTACTCCAAGGCGTTCATGTAAAGAGGGAAAGCTTTTGCGTAGTTCCCCGCATTGTCTTCTTGTACCGCTTGTTTTACGTACTCGATCGCTTGTTCTTTGAAATTACTGTACATAGCTTAGCTTTTATTTTGGTCCGATTGATTGTTAGGATTAGGGTTAGGGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_374835.p1 GENE.R_Transcript_374835~~R_Transcript_374835.p1 ORF type:5prime_partial len:86 (+),score=0.09 R_Transcript_374835:1-258(+)
LSTTEILGEFLSDGFANLGVLLVLKMSLEVLQGVHVKRESFCVVPRIVFLYRLFYVLDRLFFEITVHSLAFILVRLIVRIRVRVA*

Click here to download the sequence:
Link to NCBI Protein BLAST