Transcript Information: R_Transcript_374836.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value1.2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.26001025396727
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.25450819403369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_374836.p1 GENE.R_Transcript_374836~~R_Transcript_374836.p1 ORF type:5prime_partial len:86 (+),score=2.11 R_Transcript_374836:1-258(+)
CTCAGCACGACGGAGATACTCGGTGAATTTCTGAGTGATGGCTTCGCGAATCTTGGGGTTCTCCTCGTGCTTAAGATGAGCCTTGAAGTACTCCAAGGCGTTCATGTAAAGAGGGAAAGCTTTTGCGTAGTTCCCCGCATTGTCTTCTTGTACCGCTTGTTTTACGTACTCGATCGCTTGTTCTTTGAAATTACTGTACATAGCTCAGCTTTTATTATGGTCCAATTGATTGTTAGGGTTAGAGCTGGGGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_374836.p1 GENE.R_Transcript_374836~~R_Transcript_374836.p1 ORF type:5prime_partial len:86 (+),score=2.11 R_Transcript_374836:1-258(+)
LSTTEILGEFLSDGFANLGVLLVLKMSLEVLQGVHVKRESFCVVPRIVFLYRLFYVLDRLFFEITVHSSAFIMVQLIVRVRAGVA*

Click here to download the sequence:
Link to NCBI Protein BLAST