Transcript Information: R_Transcript_374839.p2


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value1.4E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3661245682043
Replicate 20.97205094519899
Replicate 31.060497110933
Condition 2: 8 Hour
Replicate 11.1336048586688
Replicate 20.2070452022332
Replicate 31.176493280951
Condition 3: 24 Hour
Replicate 11.2754337348725
Replicate 20.20421536009794
Replicate 30.20266393228609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_374839.p2 GENE.R_Transcript_374839~~R_Transcript_374839.p2 ORF type:internal len:108 (+),score=32.42,MIT|PF04212.14|3.1e-12 R_Transcript_374839:3-323(+)
TCGGGGAACTACGCAAAAGCTTTCCCTCTTTACATGAACGCCTTGGAGTACTTCAAGACTCATCTTAAGCACGAGAAGAACCCCAAGATTCGCGAAGCCATCATTCAGAAATTCACCGAGTATCTCCGCCGTGCTGGGGAGATTCGCGCTGTTCTTGATGACGGCGGCGGCTCTGGTTGGGCATCCTATGGTGGTGATGCTGCCGTCGCTGCTTGGCCGATGGATGGGAAGGATGGTGGTGAGGGAGAAGATGCTGAGCAATCGAAGTTGAGAGCTGGATTGAATTCTGCTATTATTAAGGAAAAGCCGAATGTTAAGTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_374839.p2 GENE.R_Transcript_374839~~R_Transcript_374839.p2 ORF type:internal len:108 (+),score=32.42,MIT|PF04212.14|3.1e-12 R_Transcript_374839:3-323(+)
SGNYAKAFPLYMNALEYFKTHLKHEKNPKIREAIIQKFTEYLRRAGEIRAVLDDGGGSGWASYGGDAAVAAWPMDGKDGGEGEDAEQSKLRAGLNSAIIKEKPNVKW

Click here to download the sequence:
Link to NCBI Protein BLAST