Transcript Information: R_Transcript_374843.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value2.7E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3670510498996
Replicate 22.8538660760017
Replicate 35.5598877660564
Condition 2: 8 Hour
Replicate 13.8036295063682
Replicate 24.5590147443194
Replicate 35.9917937970209
Condition 3: 24 Hour
Replicate 14.4578266461561
Replicate 22.5695447251158
Replicate 32.7625258342686


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_374843.p1 GENE.R_Transcript_374843~~R_Transcript_374843.p1 ORF type:complete len:103 (+),score=13.79,AAA|PF00004.25|3.4e-06 R_Transcript_374843:138-446(+)
ATGAAAGCAAATTGTTCTTACGTTTCATGTCTCCAGGGTGTTGGACACAATGATGAAAAAGTTCTTGTTCTTGCTGCAACAAACACTCCGTACGCTCTAGATCAGGCTATTCGACGACGTTTTGATAAGCGTATTTATATACCTCTACCTGATCTGAAAGCTAGGCAGCATATGTTCAAGGTTCATCTTGGGGATACACCACACAACTTGAATGAAAGTGACTTTGAATTCTTAGCTCGTAAAACAGAGGGCTTCTCGGGTTCAGATATATCTGTTTGTATGTTCACAGGTCAAGGATGTACTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_374843.p1 GENE.R_Transcript_374843~~R_Transcript_374843.p1 ORF type:complete len:103 (+),score=13.79,AAA|PF00004.25|3.4e-06 R_Transcript_374843:138-446(+)
MKANCSYVSCLQGVGHNDEKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEFLARKTEGFSGSDISVCMFTGQGCTF*

Click here to download the sequence:
Link to NCBI Protein BLAST