Transcript Information: R_Transcript_375245.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30253526444285
Replicate 20.11600165975855
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.3008554246473
Condition 3: 24 Hour
Replicate 10.25367742793043
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_375245.p1 GENE.R_Transcript_375245~~R_Transcript_375245.p1 ORF type:internal len:181 (+),score=28.33,rve|PF00665.22|1.4e-25 R_Transcript_375245:2-541(+)
GGTATGGATATTCTTTCTAAGCGTGGTTTGCTTGGTTCTCTTACTAATTCTGAGATTGAATTTTGTGAGCATTGTGTTTATGGTAAACAAAAGAGAGTTAGCTTCTCTCCAGGTACTCATAGAACCAAGTCTACACTTGATTATGTTCACTTCGATTTGTGGGGTCCTTCACAAGTTGCTACTGTAGGTGGTAACCGCTACATGATGACTATCATTGATGACTACTCAAGGAAAGTTTGGGTATATTTTCTTAAGCACAAGAATGAGGCTCTAGACAAGTTCAAGGAGTGGAAGATTTTGCTTGAAAATCAAACCGGGAAAAGGCTTAAAAGGTTGAGAACCGATAATGGTTTCGAATTTTGCGATAATGACTTCAAGGAGTTTTGTAAGAATGAAGGTGTAGCTAGACACCTCACCATTGTTGGAAAGCCACAACAAAATGGCGTTGCCGAGAGGATGAACCGAACCATTATGGAGAAGGTTTGTTGTATGCTATCTACCGCCGGTCTATGGGAGCGTCGTCACTTGTGGGGAGAGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_375245.p1 GENE.R_Transcript_375245~~R_Transcript_375245.p1 ORF type:internal len:181 (+),score=28.33,rve|PF00665.22|1.4e-25 R_Transcript_375245:2-541(+)
GMDILSKRGLLGSLTNSEIEFCEHCVYGKQKRVSFSPGTHRTKSTLDYVHFDLWGPSQVATVGGNRYMMTIIDDYSRKVWVYFLKHKNEALDKFKEWKILLENQTGKRLKRLRTDNGFEFCDNDFKEFCKNEGVARHLTIVGKPQQNGVAERMNRTIMEKVCCMLSTAGLWERRHLWGEA

Click here to download the sequence:
Link to NCBI Protein BLAST