Transcript Information: R_Transcript_375246.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13421294819646
Replicate 20.30876912376909
Replicate 30.33686378817871
Condition 2: 8 Hour
Replicate 10.1800431246121
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.50642221825818
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_375246.p1 GENE.R_Transcript_375246~~R_Transcript_375246.p1 ORF type:internal len:136 (+),score=24.26,rve|PF00665.22|1.2e-13 R_Transcript_375246:2-406(+)
GGTATGGATATTCTTTCTAAGCGTGGTTTGCTTGGTTCTCTTACTAATTCTGAGATTGAATTTTGTGAGCATTGTGTTTATGGTAAACAAAAGAGAGTTAGCTTCTCTCCGGGTATACATAGGACCAAGAGTACACTTGACTATATTCACTCCGATTTGTGGGGTCCTTCCCAAACTCCTACCGCAGGTGGTAACCGTTACATGATGACAATCACTGATGACTATTCTAGGAAGGTTTGGGTATATTTTTTGAAGCACAAGAATGAGGCCCTAGACAAGTTTAAGGAGTGGAAGGCTTTGCTTGAAAATCAAACCGGGAAAAAGCTGAAAAGATTAAGGACCGATAATGGTCTTGAATTTTGTGATAATGACTTTAAGGAGTTTCGCAAGAAAGAGGGTATTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_375246.p1 GENE.R_Transcript_375246~~R_Transcript_375246.p1 ORF type:internal len:136 (+),score=24.26,rve|PF00665.22|1.2e-13 R_Transcript_375246:2-406(+)
GMDILSKRGLLGSLTNSEIEFCEHCVYGKQKRVSFSPGIHRTKSTLDYIHSDLWGPSQTPTAGGNRYMMTITDDYSRKVWVYFLKHKNEALDKFKEWKALLENQTGKKLKRLRTDNGLEFCDNDFKEFRKKEGIS

Click here to download the sequence:
Link to NCBI Protein BLAST