Transcript Information: R_Transcript_375443.p2


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4276058847266
Replicate 21.0556799091993
Replicate 30.12797060109582
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_375443.p2 GENE.R_Transcript_375443~~R_Transcript_375443.p2 ORF type:5prime_partial len:179 (+),score=34.86,Rho_GDI|PF02115.13|2.2e-55 R_Transcript_375443:3-539(+)
GATATCAAGACATTGGTCAGCCAAGATAACGAAGATGAGAGTTTGAGAAAATATAAGGAGTCTCTTCTTGGTAATGTCAATGATATCTACTCCCCAAAGGATGATCCAAGAAGGGTCGTCATTTTGGAACTCAAAATCATGTTCCAAGACAGACCAAATGGAGATGTTGTATACAACCTCGAAGAGAAGGGAGGACTCGAAAAACTCAAAAATGAAGCATTCACCATCAAGGAGGGAGCAGGATACCGTATCCAAGTCAAATTCAGAGTTCAACACGAAATTGTCTCTGGACTCAAATATGAAAACAAAGTATACAAAGGAATCATCAGAGCTGCTGTCGAAAGAGAAATGTTGGGAAGCTTTGGTCCTCAAAAGGATGCTCACACTGTCACCTTCCCAAGAAGAGGTTATGAAGAAGCACCATCCGGAGCTTTGGCAAGAGGAAAATACAAGGCAAAGAGCAGATATTATGATGACGATAAAAACAACCATCTTAAGTACGAATACTGCTTTGAGATCAAGAAAGAGTGGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_375443.p2 GENE.R_Transcript_375443~~R_Transcript_375443.p2 ORF type:5prime_partial len:179 (+),score=34.86,Rho_GDI|PF02115.13|2.2e-55 R_Transcript_375443:3-539(+)
DIKTLVSQDNEDESLRKYKESLLGNVNDIYSPKDDPRRVVILELKIMFQDRPNGDVVYNLEEKGGLEKLKNEAFTIKEGAGYRIQVKFRVQHEIVSGLKYENKVYKGIIRAAVEREMLGSFGPQKDAHTVTFPRRGYEEAPSGALARGKYKAKSRYYDDDKNNHLKYEYCFEIKKEWD*

Click here to download the sequence:
Link to NCBI Protein BLAST