Transcript Information: R_Transcript_375831.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value8.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.063821541799716
Replicate 20.73413637819224
Replicate 30.24028046429531
Condition 2: 8 Hour
Replicate 10.085614912402955
Replicate 20.078184901542607
Replicate 30.063467170001353
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15306087193634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_375831.p1 GENE.R_Transcript_375831~~R_Transcript_375831.p1 ORF type:5prime_partial len:286 (+),score=87.22,AAA|PF00004.25|4e-37 R_Transcript_375831:2-859(+)
TTGTTGGCTAAGGCTATTGCTAACGAATGTCAAGCTAACTTTATTTCAGTTAAGGGTCCAGAATTGTTGACTATGTGGTTCGGTGAATCTGAAGCTAACGTTAGAAATATTTTCAATAAGGCTAGAGCTGCTGCTCCTTGTGTCTTGTTCTTTGACGAATTGGATTCTATTGCTAAGGCTAGAGGTGGTAGCAGTGGTGATGCTGGTGGTGCTTCTGATCGTGTTATTAACCAAATCCTTACTGAAATGGATGGTATGGGTAAGAAGAAGAATGTTTTCATTATTGGTGCTACCAATAGACCAGATACTATTGATCCAGCTGTTATGAGACCAGGTCGTTTAGATCAATTGATTTATATTCCATTACCTGATGAACCATCAAGAATGTCAATTTTGAAGGCTTCTACTAGAAAGTCACCACTTGCTCCTGATGTTAGTTTGACTGCTATTGCTAAGGCTACTAAGGGTTTCTCTGGTGCTGATTTGACTGAAATTTGTCAACGTGCTGCCAAGTTAGCTATCCGTGAATCTATTCAAAAGGAAGTTGACTTTAGAAGACAAAAGGAAGAAGAAAAGAAGGCCAAGCAAATGGAAGATGAAGACGAAGATGAAGAATTCGGTGAAGAAATTGACTTTGTACCATATATTAACAGAGCTCACTTTGAAGAAGCTATGAGATTTGCTCGTAAATCTGTTCCAGAACATGAAATTAGAAAGTACGAAATGTTCTCAACATCTTTGCAACAAGCTGCTGGTGATGTCAGAAGTTTCAAGTTCTCTGATTATGATACTGCTGATACCACAACTGCTTCATCAACAACTGCTGATCAAGTCCTTGACTCTGATTTGTATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_375831.p1 GENE.R_Transcript_375831~~R_Transcript_375831.p1 ORF type:5prime_partial len:286 (+),score=87.22,AAA|PF00004.25|4e-37 R_Transcript_375831:2-859(+)
LLAKAIANECQANFISVKGPELLTMWFGESEANVRNIFNKARAAAPCVLFFDELDSIAKARGGSSGDAGGASDRVINQILTEMDGMGKKKNVFIIGATNRPDTIDPAVMRPGRLDQLIYIPLPDEPSRMSILKASTRKSPLAPDVSLTAIAKATKGFSGADLTEICQRAAKLAIRESIQKEVDFRRQKEEEKKAKQMEDEDEDEEFGEEIDFVPYINRAHFEEAMRFARKSVPEHEIRKYEMFSTSLQQAAGDVRSFKFSDYDTADTTTASSTTADQVLDSDLYE*

Click here to download the sequence:
Link to NCBI Protein BLAST