Transcript Information: R_Transcript_37599.p1


Annotated TAIR IDAT1G28120.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9813219-9815143 | Reverse length=306
E-Value1.2E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1136.98581376697
Replicate 2122.5803428835
Replicate 3139.14545782517
Condition 2: 8 Hour
Replicate 1116.96160732082
Replicate 2134.16529104711
Replicate 3152.0270818303
Condition 3: 24 Hour
Replicate 1149.93156953238
Replicate 2138.39853394443
Replicate 3150.09723699526


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37599.p1 GENE.R_Transcript_37599~~R_Transcript_37599.p1 ORF type:complete len:309 (+),score=66.27,Peptidase_C65|PF10275.5|8.8e-86 R_Transcript_37599:367-1293(+)
ATGGAGAATCAGGAGGAGAATTTGAAATTGAATCTGGAAGAATCCAATTCCAAGCCTGCTGGCGTAATCGACGACGACTGGAAGAAGTTTAGGGACGATGATATCATGCATCAACATTCAGCTATTCGAGCCGAACAGGCCCACAAAATCCCTTTTGTTGGCGACAAGGAACCTCTTTCTGTGCTGGCTGCAGAATACCATTTAGGAAGTCCTATTTTGGTTGAAAAGATAAAGCTTCTTGATGATCAGTACTCTGCAATTAGGCGAACACGAGGAGATGGAAATTGCTTTTTCCGGAGTTTTATGTTCTCATATTTGGAGCACATTCTTGAAACACAAGACAAAGCTGAGGTTGATCGTGCCAAGGCCAATGTTGAAGAATGTCGAAAGACACTCCAGACTCTTGGTTATGCAGACTTCACATTTGAAGATTTTTTCGCGTTATTTCTTGAGCAGCTGGAAAGTGTCGTTCAAGGGACAGATTCTTCAATAAGTCATGATGAGCTTGTGGAGAGGAGTCGGGATCAATCAATATCTGACTATGTTGTAATGTTCTTTAGATTTGTCACGTCTGGGGAGATACGAAAACGTTCAGAGTTCTTTGAGCCTTTCATATTAGGATTGACAAATGCCACTGTGGATCAGTTCTGCAAATCTTCAGTGGAGCCTATGGGTGAAGAAAGCGATCATGTTCATATTATTGCTCTATCAGATACACTAGTTGTTCCAATTCGTGTGGTGTACCTGGATCGTAGCTCATGTGAGAGTGGTGGAATTAATGTAAATCATCATGATTTCATACCTGTTGCTTGGTCTAATGTTGCTGGAGAAGGTAGATCTGAGATCAAGCCCTACATAACTCTGTTGTATCGTCCAGGTCACTATGACATCCTTTACCCTAAACAATGCGGCACTGATGCTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37599.p1 GENE.R_Transcript_37599~~R_Transcript_37599.p1 ORF type:complete len:309 (+),score=66.27,Peptidase_C65|PF10275.5|8.8e-86 R_Transcript_37599:367-1293(+)
MENQEENLKLNLEESNSKPAGVIDDDWKKFRDDDIMHQHSAIRAEQAHKIPFVGDKEPLSVLAAEYHLGSPILVEKIKLLDDQYSAIRRTRGDGNCFFRSFMFSYLEHILETQDKAEVDRAKANVEECRKTLQTLGYADFTFEDFFALFLEQLESVVQGTDSSISHDELVERSRDQSISDYVVMFFRFVTSGEIRKRSEFFEPFILGLTNATVDQFCKSSVEPMGEESDHVHIIALSDTLVVPIRVVYLDRSSCESGGINVNHHDFIPVAWSNVAGEGRSEIKPYITLLYRPGHYDILYPKQCGTDAP*

Click here to download the sequence:
Link to NCBI Protein BLAST