Transcript Information: R_Transcript_37602.p1


Annotated TAIR IDAT1G28120.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9813219-9815143 | Reverse length=306
E-Value2.7E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4330837113209
Replicate 21.0411388636181
Replicate 32.1770866310393
Condition 2: 8 Hour
Replicate 10.70826882078808
Replicate 20.83160304368046
Replicate 31.050093176386
Condition 3: 24 Hour
Replicate 10.94866972015306
Replicate 21.5493363683463
Replicate 31.6280110924139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37602.p1 GENE.R_Transcript_37602~~R_Transcript_37602.p1 ORF type:complete len:242 (+),score=49.54,Peptidase_C65|PF10275.5|3.6e-53 R_Transcript_37602:367-1092(+)
ATGGAGAATCAGGAGGAGAATTTGAAATTGAATCTGGAAGAATCCAATTCCAAGCCTGCTGGCGTAATCGACGACGACTGGAAGAAGTTTAGGGACGATGATATCATGCATCAACATTCAGCTATTCGAGCCGAACAGGCCCACAAAATCCCTTTTGTTGGCGACAAGGAACCTCTTTCTGTGCTGGCTGCAGAATACCATTTAGGAAGTCCTATTTTGGTTGAAAAGATAAAGCTTCTTGATGATCAGTACTCTGCAATTAGGCGAACACGAGGAGATGGAAATTGCTTTTTCCGGAGTTTTATGTTCTCATATTTGGAGCACATTCTTGAAACACAAGACAAAGCTGAGGTTGATCGTGCCAAGGCCAATGTTGAAGAATGTCGAAAGACACTCCAGACTCTTGGTTATGCAGACTTCACATTTGAAGATTTTTTCGCGTTATTTCTTGAGCAGCTGGAAAGTGTCGTTCAAGGGACAGATTCTTCAATAAGTCATGATGAGCTTGTGGAGAGGAGTCGGGATCAATCAATATCTGACTATGTTGTAATGTTCTTTAGATTTGTCACGTCTGGGGAGATACGAAAACGTTCAGAGTTCTTTGAGCCTTTCATATTAGGATTGACAAATGCCACTGTGGATCAGGTGTGTTTGGATTCTGAAGGTTGGATTATTACATTCGCAAAATTTCTTGCTTTTCTTCTGTATTTGTTACTCAGATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37602.p1 GENE.R_Transcript_37602~~R_Transcript_37602.p1 ORF type:complete len:242 (+),score=49.54,Peptidase_C65|PF10275.5|3.6e-53 R_Transcript_37602:367-1092(+)
MENQEENLKLNLEESNSKPAGVIDDDWKKFRDDDIMHQHSAIRAEQAHKIPFVGDKEPLSVLAAEYHLGSPILVEKIKLLDDQYSAIRRTRGDGNCFFRSFMFSYLEHILETQDKAEVDRAKANVEECRKTLQTLGYADFTFEDFFALFLEQLESVVQGTDSSISHDELVERSRDQSISDYVVMFFRFVTSGEIRKRSEFFEPFILGLTNATVDQVCLDSEGWIITFAKFLAFLLYLLLRF*

Click here to download the sequence:
Link to NCBI Protein BLAST