Transcript Information: R_Transcript_37742.p1


Annotated TAIR IDAT1G55620.2
Annotated Gene Namechloride channel F
Annotated Gene Symbol(s)CLC-F, ATCLC-F
Annotation TypeOrtholog
Chromosome Positionchr1:20787338-20790990 | Reverse length=781
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.11672672497
Replicate 215.241369513708
Replicate 320.44118135927
Condition 2: 8 Hour
Replicate 120.195475594787
Replicate 223.256436558229
Replicate 332.054971946641
Condition 3: 24 Hour
Replicate 124.710530933449
Replicate 222.496916139951
Replicate 324.599698133709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37742.p1 GENE.R_Transcript_37742~~R_Transcript_37742.p1 ORF type:complete len:799 (+),score=185.51,Voltage_CLC|PF00654.16|1.6,Voltage_CLC|PF00654.16|7.5e-68,CBS|PF00571.24|3.7e-06,CBS|PF00571.24|7e-05 R_Transcript_37742:410-2806(+)
ATGAAAACGACGAATGAGTGTCAAGATAATGTGCTGCTGGTGAGATCGAATGCAGAGGCGACTACAGCTCAGTTGGAGTCGGAGATGGAGGGGGGAGAGGATGCTAAGCAGCAGCAACCGGCCGACGAAGGAGGAGGAGGAGGTCGCATCAGCGATCTGATATCGAAACTGAAATCGCCTGTTAGTCTGGATCGGGGACTCCTCAATCTCAATCTCAATGCCAGTGGTCGCCTTAGCTTCAAACGAAGCAGAGACAAGGAAGGAGGTGTTGGTGGTTGGAAGCGAATTGATGACGAGGAAGATCCTCCTTCTTCTTCCTCGCCCTCTACTCCTGCTCGTCGTCTTCGTCATCATCATCATCATCCTTCTTACGCTGTTGACGATAATGAGCAAACTGGCGCTGAAGCCCTCGGTGATCCTCCAGAATGGGCGTTGCTTCTCATAGGCTGCCTGCTTGGCCTTGCCACTGGTCTTTGTGTTGCGGCTTTTAACCGTGGGGTGCATGTCATTCATGAATGGGCTTGGGCTGGTACTCCAAATGAAGGTGCTGCTTGGCTTCGATTGCAACGTCTGGCTGACACTTGGCATCGTATACTTTTAATACCAGTCACTGGTGGAGTTATTGTGGGCATGATGCATGGTTTACTTGAAATCTTAGAGCAAATAAAGCCCTCTAGCAACTCCAGCTCTTCACAAAGGCAAGGTGTTGATGTGCTTGCTGGAGTATTTCCGACAATAAAAGCGATTCAAGCTGCAGTTACATTAGGTACTGGTTGTTCTTTAGGTCCTGAGGGTCCTAGTGTAGATATTGGTAAGTCATGTGCTCATGGGTGCTATGTAATGATGGAACATAACAGAGAAAGAAAGATTGCTCTTGTTGCTGCTGGTGCTGCTGCTGGAATTGCTTCAGGTTTTAACGCAGCAGTTGCTGGTTGTTTTTTCGCTATCGAGACAGTATTAAGACCTCTTCGAGCTGAGAACTCACCACCATTTACTACAGCAATGATAATTCTAGCTTCTGTAATTTCATCCACTGTATCCAATGAATTACTTGGGGATAAGTCAGCTTTCACAGTGCCGGCATATGACTTGAAATCTGCTGCAGAACTCCCATTGTACTTGATATTGGGTATGCTTTGTGGCGTTGTAAGTGTAGTCTTCACACGCTTAGTAGCTTGGTATACTAAGTTCTTTGACTTCATCAGGGAGAAGTTTGGCCTCCCTGCTGTTGTCTGTCCCACTTTAGGAGGTTTAGGGGCAGGTTTAATAGCCCTTAAGTACCCAGGGATTTTGTACTGGGGTTTCACAAATGTTGATGAAATCCTTCATACTGGGAAAAGTGCTTCAGCTCCTGGAATCTGGCTGTTAGCTCAATTAGCTGCAGCAAAGGTAGTTGCCACAGCTTTGTGTAAAGGATCTGGGCTTGTAGGTGGCCTTTATGCACCAAGCTTAATGATTGGTTCTGCTGTTGGTGCTGTATTTGGCGGTTCAGCTGCAGAATTGATAAACTCAGCCATCCCAGGAAATGCTGCGGTTGCCCAGCCTCAGGCCTATGCACTGGTGGGGATGGCTGCTACATTAGCCTCTGTTTGTTCAGTGCCCTTGACATCTGTTCTACTTCTGTTTGAGCTGACTAAAGATTACAGGATACTGCTACCACTAATGGGGGCTGTTGGTTTGGCAATATGGGTTCCCTCTGTTACAAATCAAGGAAAAGAGACTGAGCCGTCTGGTTCAAGGAATTCAGCAAGAGGTTATTCTTTTGTTTCTCCTCGCGAAGATGCTGAGGAACCTGACAAGGGCACTGAAGATGCTGAGCATTTAGAACTCTCTGTCATGAGAAATGCTAAAGTTCTTGAATCAATAGAAGGAGAAGTTCTGGAAGATCTGAAGGTCTCCCATGCTATGTCGATGAACTATTTGAAAGTTGGTTTGACAACAACCTTGAAAGATGCAATGAACTATATACGTGAATACCAGCAACATTGTCTCTTAGTGGTTGATGATAAGGACCTTCTAGAGGGTATCTTGACAAATGGTGATATTGAGCGTGCTTTGTCCAGGAAAACTAGTGAGGTCCCTAACAGCAGGTCAACAGTTGAGGATGTACATGAATGTCCAATTTATTCTGTCTGTACTCGAGGGATAAGCTACCGGGGGCTGGAGCGTGGTGTTTTGACTTGCTACCCAGACACTGATCTAGTGACAGCCAAGGATCTGATGGAGGCTAAGGGTATTAGGCAGTTACCAGTTGTTAAGCGTGGTGGAGGCTCACAAGAAGAAAAAAGGCGAAGAATTGTTGCTATCCTACATTATGATTCTATATCAAATTGTCTCAGAGAAGTGCAGCAGTTGCAAGCAGGTCATCATGGGGAATTGGTTGCTGGTAGCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37742.p1 GENE.R_Transcript_37742~~R_Transcript_37742.p1 ORF type:complete len:799 (+),score=185.51,Voltage_CLC|PF00654.16|1.6,Voltage_CLC|PF00654.16|7.5e-68,CBS|PF00571.24|3.7e-06,CBS|PF00571.24|7e-05 R_Transcript_37742:410-2806(+)
MKTTNECQDNVLLVRSNAEATTAQLESEMEGGEDAKQQQPADEGGGGGRISDLISKLKSPVSLDRGLLNLNLNASGRLSFKRSRDKEGGVGGWKRIDDEEDPPSSSSPSTPARRLRHHHHHPSYAVDDNEQTGAEALGDPPEWALLLIGCLLGLATGLCVAAFNRGVHVIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILEQIKPSSNSSSSQRQGVDVLAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCAHGCYVMMEHNRERKIALVAAGAAAGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNELLGDKSAFTVPAYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWYTKFFDFIREKFGLPAVVCPTLGGLGAGLIALKYPGILYWGFTNVDEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGSAVGAVFGGSAAELINSAIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVTNQGKETEPSGSRNSARGYSFVSPREDAEEPDKGTEDAEHLELSVMRNAKVLESIEGEVLEDLKVSHAMSMNYLKVGLTTTLKDAMNYIREYQQHCLLVVDDKDLLEGILTNGDIERALSRKTSEVPNSRSTVEDVHECPIYSVCTRGISYRGLERGVLTCYPDTDLVTAKDLMEAKGIRQLPVVKRGGGSQEEKRRRIVAILHYDSISNCLREVQQLQAGHHGELVAGSH*

Click here to download the sequence:
Link to NCBI Protein BLAST