Transcript Information: R_Transcript_377565.p1


Annotated TAIR IDAT1G18260.1
Annotated Gene NameHCP-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6279047-6282008 | Reverse length=678
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73998490356968
Replicate 20.56746757881887
Replicate 30.23216288104208
Condition 2: 8 Hour
Replicate 10.248167550141
Replicate 20.22663055920121
Replicate 30.55190707967393
Condition 3: 24 Hour
Replicate 10.077560159553054
Replicate 20.22353302929639
Replicate 30.073944948266545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_377565.p1 GENE.R_Transcript_377565~~R_Transcript_377565.p1 ORF type:internal len:296 (+),score=38.04,Sel1|PF08238.8|2.7e+02,Sel1|PF08238.8|3.2e-06,Sel1|PF08238.8|1.1e-06,Sel1|PF08238.8|1.3e-05,Sel1|PF08238.8|0.0019 R_Transcript_377565:3-887(+)
TATTTTATGATGGAAGAACCTTCTTTTACTTTTGACGATCAAGAAGAAATATTGCGCAGTTTTTGGTTGAAGTTTGGAATAGGATTGAAGATTGATGAAGATGAGGCGATCAAATGTTGTCTGAGAAGCTCATACAAGGGAAATTTGATCGCAAAGGGATTGAGGTTGTTCATGGGATGGGAATCAGACAAAGACTATAGAGGAGCATTGTTCTTTTTTCTTGAACATGTTGCAGATGATGTTGATATTGTGAGAAAAGATACACCCTACGCTTTAAACATGTTGGGTTTCATGTTCATTAATGGCTATGGTACTGATATTGATCAACAGAAAGCCATCTATTACTACAAAAAAGCCATTGAAAAGAACAACCCAATGGCAATGTATAACTTTGGACACATCTACGAGAATGGTTTGGGAACAGAAAAAAAAGTCCAAACTGCGATAGAGTACTATGAAAAATCGTCAGAATTGGGAAGTTGTTATGCTATGAATAATCTTGCGTATTTTTTGGAAAAAGGAACACAAACCAAAAAGAATGTTGAAAGAGCGATCTCATTATACCTTAAATCAGCAGAGTTTGGATACAGTTTGCCTTATTATAATGTCGCTTATCTTTATCGTGAGGGAAAGAATGTACCCAAAGATGTTGACCTTGCAACTCACTATTTCTACAAAGCTTACATTACCCAAGACTATCTGAGCGATCTTTCGAAATCCAAGTTTCTCAAGCTTCTGAACAAAAAAATTGAGTGGAAACGAGAATACCACCCTTATTGGAGGAAGAAAGAAGGTCTCAACAAACAAATCACTACTCTCCTTCTTGTATCAAAAAACAGAAAAACATCAAATCATGACTACATAAAATACTTGGTGAGGGATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_377565.p1 GENE.R_Transcript_377565~~R_Transcript_377565.p1 ORF type:internal len:296 (+),score=38.04,Sel1|PF08238.8|2.7e+02,Sel1|PF08238.8|3.2e-06,Sel1|PF08238.8|1.1e-06,Sel1|PF08238.8|1.3e-05,Sel1|PF08238.8|0.0019 R_Transcript_377565:3-887(+)
YFMMEEPSFTFDDQEEILRSFWLKFGIGLKIDEDEAIKCCLRSSYKGNLIAKGLRLFMGWESDKDYRGALFFFLEHVADDVDIVRKDTPYALNMLGFMFINGYGTDIDQQKAIYYYKKAIEKNNPMAMYNFGHIYENGLGTEKKVQTAIEYYEKSSELGSCYAMNNLAYFLEKGTQTKKNVERAISLYLKSAEFGYSLPYYNVAYLYREGKNVPKDVDLATHYFYKAYITQDYLSDLSKSKFLKLLNKKIEWKREYHPYWRKKEGLNKQITTLLLVSKNRKTSNHDYIKYLVRDV

Click here to download the sequence:
Link to NCBI Protein BLAST