Transcript Information: R_Transcript_377654.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value7E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5239663795211
Replicate 20.95618825425266
Replicate 31.5647866289592
Condition 2: 8 Hour
Replicate 10.9292548367076
Replicate 21.315345990658
Replicate 31.9632671828502
Condition 3: 24 Hour
Replicate 11.9603440706768
Replicate 21.297368170034
Replicate 31.8689690909115


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_377654.p1 GENE.R_Transcript_377654~~R_Transcript_377654.p1 ORF type:complete len:527 (+),score=60.76,RVT_1|PF00078.23|1.1e-40 R_Transcript_377654:1406-2986(+)
ATGAACTTGTTCGTGTCGTCGTCTAGCTCTCATGTGGAGGATGCTCTCAAGGGTCTTGACTGCCGTGTTACAGAGGCCATGAATAGTTCACTCACTCAGCCCTATTCGGTGGAAGAGGTCAAGCAGGCCTTGGGGCAAATGCACCCTATCAAAGCTCCCGGGCACGATGGTATGTGTCCTCTCTTTTTCCAAAAATATTGGCATATTGTGGGTAGTCATATTGCTTCTCTTGTTATTGCGTTTTTGGAGGGAGGGGAGATGGAGGAGGGTTTGAACCATACTTATATTGTGTTGATCCCAAAGAAGAAAAATCCTAAACGGATAATTGGATTTAGGCCCATTAGTTTGTGTAATGTGGTGTATAAGCTTATCTCCAAGGTTTTGGCAAATAGGCTTAAGCCTCTTCTCAATTCTATTGTGTCTTTAAATCAGAGTGCCTTTACTCCAGGCCGTTTAATTACTGATAACGTCCTGATGGCTTTCGAGACTTTTCATTTCATGAAGTCTAGTAAGTCTAAGGATGGGAATATAGCTCTTAAGCTTGATATGGCAAAGGCATATGATCGTGTTGAGTGGGATTTTCTTGAATTGGTTTTGACTAAGTTTGGTTTTAATTCTACTTGGATTGGACGAGTTATGGGCTGTGTTCGCAGTGTGTCTTTCTCCATACTAGTTAACGGGCAACCAACGGAGGTCTTTAGGCCAAGAAGGGGTCTTCGTCAAGGAGACCCAATCTCCCCGTACCTTTTTTTGCTTGTTACGGAAGTTTTATCTGGTTTAATTAGAAAAGCTAATGAGGATGCAGCTCTGTTTGGTGTTCACATTTGTCCTTCTGCCCCTACTGTTACTCACTTGTTTTTCGCAGATGATAGTTTATTATTTTTTAAAGCCACAGGAATCCATGCTCAAGCTTTGAAGAATATTCTTACGGTGTATGAAGAAGCATCTGGCCAGAAGATTAGTTATGAGAAGTCTTTATTATCATTTAGCCCCAATGTCCCTTTGAATTGTAAAGCTCCCTTATTGACCATGTTGGGGGTAGCTGAGGTAACGTCACATGATCGCTACCTTGGGTTACCAACTATGTTAGGTCATTCCAAGAAGCAGTTATTTGGCCCCCTCAAGGAAAGGCTTTGGAAGAAACTACAAGGATGGAAAAGATCTCTATTGTCGAAAGCGGGTAGAGAAATCATGATAAAGGCAGTAGCCCAGTCGATATCTACCTATGCGATGAGTGTGTTCAAATTTTCAACAAGCATTTGTAATGAGATAAGATCCATGGTTGCTAATTTTTTCTGGGGACAAAAAAAGAACGAGAGAAAAATCAATTGGGTCTCTTGGAATAGATTATGTACGTCCAAGCTTCATGGGGGCATGGGCTTTAGGGATCTCAAGGCTTTCAATTGGGCACTACTTGGGAAACAAGCATGGCGTCTTGCTCGGGGAGAAGGGGGCCTGCTTGAGCAGCTTCTTAAAGCTCGTTATTATCCTCATACGAGTTTTATGGAGGCTAGTTTAGGCTCAAATCCAAGCTACACATGGCGGGGTATTTGGGAAGCACGCTGGGTGGTACGTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_377654.p1 GENE.R_Transcript_377654~~R_Transcript_377654.p1 ORF type:complete len:527 (+),score=60.76,RVT_1|PF00078.23|1.1e-40 R_Transcript_377654:1406-2986(+)
MNLFVSSSSSHVEDALKGLDCRVTEAMNSSLTQPYSVEEVKQALGQMHPIKAPGHDGMCPLFFQKYWHIVGSHIASLVIAFLEGGEMEEGLNHTYIVLIPKKKNPKRIIGFRPISLCNVVYKLISKVLANRLKPLLNSIVSLNQSAFTPGRLITDNVLMAFETFHFMKSSKSKDGNIALKLDMAKAYDRVEWDFLELVLTKFGFNSTWIGRVMGCVRSVSFSILVNGQPTEVFRPRRGLRQGDPISPYLFLLVTEVLSGLIRKANEDAALFGVHICPSAPTVTHLFFADDSLLFFKATGIHAQALKNILTVYEEASGQKISYEKSLLSFSPNVPLNCKAPLLTMLGVAEVTSHDRYLGLPTMLGHSKKQLFGPLKERLWKKLQGWKRSLLSKAGREIMIKAVAQSISTYAMSVFKFSTSICNEIRSMVANFFWGQKKNERKINWVSWNRLCTSKLHGGMGFRDLKAFNWALLGKQAWRLARGEGGLLEQLLKARYYPHTSFMEASLGSNPSYTWRGIWEARWVVRK*

Click here to download the sequence:
Link to NCBI Protein BLAST