Transcript Information: R_Transcript_377685.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeHomolog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value5E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.044628266392955
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.17960292137344
Replicate 20
Replicate 30.35504372851613
Condition 3: 24 Hour
Replicate 10.11226311602789
Replicate 20.16177451508981
Replicate 30.16054551115084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_377685.p1 GENE.R_Transcript_377685~~R_Transcript_377685.p1 ORF type:internal len:409 (-),score=88.70 R_Transcript_377685:1-1224(-)
CTTTCTATCCAAGTGCTGTCCAAGATTGGTCCTAAATCAGAGTCTCAACTTGATGTTTTGGATATGGGTCTCTATGATGAGGTGGAAGAAGTTAGCTTGCTTCAGAAAGAGGTGTGCGAGAATGTCAAAAGGAGAATTCCCTTTGCTCTTGGTTATATGTCATGCTTGTACGGGTTTTGCCATGAATATGATGCAGATGTTACAAACGCTTATGACTATACAATATCCATTTATAGTGGTGAAAAGCAAAATGTGATGCTTGACTCTTTATTGGAAGGCTTTTCGTGTCCTAAGTGTGACCAAAGTGCTGATGTGTGTGATGCTTGGCATTATGCTGCTGACACAAGAGGCCTGAACACCGGTGGTTGCAACTTTATTCACATACAGTCGTTGTTCTTCAATCTTCTTAATGATGAATCCTCAGAAGAGGTCCAAATTGCCTGCATTGAGGTACTTCATCGAATCATTGTACACGTTGGGAGGGATGTTCTGCTGAAAACTAGATCTGAGTGGATCAAATGTATTGAAGTGTTACTCCTTCACAGAAAGAGGTCTTTGAGGGAAGCATTCTGCACCCAGATTAGGTTTTTCTTGAAAGAATCTATCTTGAGTTTCTTATTTCCAGAGAGTGAGATATTGAATGCAAGTAAAGAGCGTATGTTCCTTGACAAGATAAAAGTAGCTCTTGCAGCAACTGAAGATCCCCAAGTTATTGTGACTTTGTTGGAGTCTGCAGCAGAGATTATGATGGCCGTTGATATAAAGTATCCGCTTTTCCTATCGTCTCTTATTCTACTAGTTGATAGGCTTGATGATCCTCATCTGACAGTGACAGTAACTGCTGCAAGGTTAATTAATAGGTCTTGCTATTTCCATCTGAGAGGAGGGATTAGGCTAGTCCTTTCTAAGGTTTCGAATATTCGAAACGAGCTATTTGAGTATCTCTGCCCAAAAGTTGTAAGTCATCCTAAAGTGGTGAGGGAGTTTGCAGAAGCTGTTCTTGGCATTGAAATGAAAGAACTTGTTCTTGAAATGATACCAGTTGTCCTGCCAAAGCTTGTTGTCTCTCAGAAGCATGATGATCAATCAGTTGCTATTTTGGAAGAGTTGGCCAGGTGGTTGGAAATAGACATGGTGAAGCTGATTGTTGATTGGGTACCAAAAGTTCTCGCTTATACTCTTCGTCGAGCTGATGAAAAAGAGTTGTTTTCAGCTCTGCAGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_377685.p1 GENE.R_Transcript_377685~~R_Transcript_377685.p1 ORF type:internal len:409 (-),score=88.70 R_Transcript_377685:1-1224(-)
LSIQVLSKIGPKSESQLDVLDMGLYDEVEEVSLLQKEVCENVKRRIPFALGYMSCLYGFCHEYDADVTNAYDYTISIYSGEKQNVMLDSLLEGFSCPKCDQSADVCDAWHYAADTRGLNTGGCNFIHIQSLFFNLLNDESSEEVQIACIEVLHRIIVHVGRDVLLKTRSEWIKCIEVLLLHRKRSLREAFCTQIRFFLKESILSFLFPESEILNASKERMFLDKIKVALAATEDPQVIVTLLESAAEIMMAVDIKYPLFLSSLILLVDRLDDPHLTVTVTAARLINRSCYFHLRGGIRLVLSKVSNIRNELFEYLCPKVVSHPKVVREFAEAVLGIEMKELVLEMIPVVLPKLVVSQKHDDQSVAILEELARWLEIDMVKLIVDWVPKVLAYTLRRADEKELFSALQF

Click here to download the sequence:
Link to NCBI Protein BLAST