Transcript Information: R_Transcript_37796.p2


Annotated TAIR IDAT5G46560.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18888061-18890090 | Forward length=387
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9016170774061
Replicate 23.8649906238957
Replicate 39.6869288341938
Condition 2: 8 Hour
Replicate 15.8473707336705
Replicate 24.0049340611079
Replicate 34.9668586274691
Condition 3: 24 Hour
Replicate 18.3379100876736
Replicate 25.9252934332894
Replicate 37.0781134559618


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37796.p2 GENE.R_Transcript_37796~~R_Transcript_37796.p2 ORF type:complete len:201 (+),score=38.46,MSC|PF09402.6|6.2e-11 R_Transcript_37796:757-1359(+)
ATGTTGGAGAACAATGGGTTGGTTCAGAGTTCAACTTTGGATCATGTGAAAATTCTGTATGTCAAAGAAAGAGCAAGGCAATACCTTGACAAATTGCTCGATATAAGGACAACTAATGATGGGATCAAAGAGTTCAAGTGTCCTGAAATTCTAGCTGACAGTTACAAATCAGTGACCTGTCGTGGCCGACAATGGATAGCCAAACATATTGTCTTCCTCATACCAATTTGTGCTGTGCTTGCAGGATTAACATTGCTGGTGTTCAGAATTCGTAGAAGATGGTATTTGACAAATAGAGGAGAACAGCTTTACCATCAGGTTTGTGACATACTCGAAGAGAATGCTTTGATGTCTAAAAGCACGATGGACAGAGAACCTTGGTTAGTTGCCTCTAGGCTACGAGATCACCTACTTTCGCCTATTGAACGGAAGGATTCTTGTCTGTGGAAGATGGTTGAGGAGTTGGTTGAGTTAGATTCTCGCTTGGATCGCTATCCGAAGCTTGTCAAGGGTGAATCAAAGGTGGTTTGGGAATGGCAAGTTGAAGGTTCTTTGAGTTCTAGGAGGCAACAGCGGAGAGAGGCAAAAGGAAATCTGCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37796.p2 GENE.R_Transcript_37796~~R_Transcript_37796.p2 ORF type:complete len:201 (+),score=38.46,MSC|PF09402.6|6.2e-11 R_Transcript_37796:757-1359(+)
MLENNGLVQSSTLDHVKILYVKERARQYLDKLLDIRTTNDGIKEFKCPEILADSYKSVTCRGRQWIAKHIVFLIPICAVLAGLTLLVFRIRRRWYLTNRGEQLYHQVCDILEENALMSKSTMDREPWLVASRLRDHLLSPIERKDSCLWKMVEELVELDSRLDRYPKLVKGESKVVWEWQVEGSLSSRRQQRREAKGNLP*

Click here to download the sequence:
Link to NCBI Protein BLAST