Transcript Information: R_Transcript_378.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1721053610786
Replicate 26.4488636992916
Replicate 35.0722061820052
Condition 2: 8 Hour
Replicate 13.1481826360744
Replicate 26.7082645523557
Replicate 36.6123724402838
Condition 3: 24 Hour
Replicate 14.4275771082001
Replicate 22.6781385795701
Replicate 34.533881685143


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378.p1 GENE.R_Transcript_378~~R_Transcript_378.p1 ORF type:5prime_partial len:140 (+),score=23.54,Cnd2|PF05786.10|3e-30 R_Transcript_378:2-421(+)
GAGGATGAGTGTATTCACAGCGACTTAGAAGAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAAAATTCAAAACAAGTTGATGTGCATTTGCTGAAGGAAACACTTTGGAATCACATGCAAGGATCACTCCAGACACCTGAAAATGAAACAAGTTTTCTCACAAAGGATGCCGTATCTTTCAAACATATACTAGCGACCTTTCCCGATGATTGCCATGCTGCTGCATTCCAGGACATCTCCCCTCATCTATGTTTCATTTGTGTCCTGCATCTTGCAAATGAACACGGATTGATAATCAAAGGCTCCCCCAAATTGGACGACCTTAGAATTCACATTCCTTTTGCATATGAGAACAAAGGCAGTAACTCGGGTGAAGTTACTCAAGCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378.p1 GENE.R_Transcript_378~~R_Transcript_378.p1 ORF type:5prime_partial len:140 (+),score=23.54,Cnd2|PF05786.10|3e-30 R_Transcript_378:2-421(+)
EDECIHSDLEEDELVSQPRQVDKVEVQYDKNSKQVDVHLLKETLWNHMQGSLQTPENETSFLTKDAVSFKHILATFPDDCHAAAFQDISPHLCFICVLHLANEHGLIIKGSPKLDDLRIHIPFAYENKGSNSGEVTQAF*

Click here to download the sequence:
Link to NCBI Protein BLAST