Transcript Information: R_Transcript_378125.p1


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value7E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23252179560151
Replicate 20
Replicate 30.14590278723664
Condition 2: 8 Hour
Replicate 10.15596092323086
Replicate 20.42727799696533
Replicate 30.11561535426998
Condition 3: 24 Hour
Replicate 10
Replicate 20.14047935599094
Replicate 30.13941213176368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378125.p1 GENE.R_Transcript_378125~~R_Transcript_378125.p1 ORF type:internal len:157 (+),score=5.39,Ribosomal_L21e|PF01157.14|3.3e-40 R_Transcript_378125:1-468(+)
TTTAATCAATACCCAAACCTAGTCTTCGACATGCCTCACTCATACGGTTATAGAGCCAGAACCAGAGGAAAGTTCTCCAAGGCCTTCAGAAGGAGGGGAGCTGTCAGAATCTCTAAGTCCCTCACCAACTACAGAATCGGTGACTACGTTGATATCGTCGTTGATGGTTCAATTCACAAGGGTATGCCACACAACCTCTATCACGGAAGAACCGGTAGAGTCTTCAACGTCAATCCCAGATCAGTCGGTGTCGTTGTCAACAAACAATTCAGAAATAGAATTATCCCCAAGAGAATACATGTCCGTATTGAACACTTGAGACAATCCACCAGCAGACTCGGTTTCCTCCAAAGAGTCAGAGAAAATGATGCCAAGAAGACCGCCGCTAACAAGGAAGGTAAGAGAATCTCCACCAAGAGACAACCAGTTGCCCCAAGAGAAGCTCACGTTGTTAAGGGTGAAGTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378125.p1 GENE.R_Transcript_378125~~R_Transcript_378125.p1 ORF type:internal len:157 (+),score=5.39,Ribosomal_L21e|PF01157.14|3.3e-40 R_Transcript_378125:1-468(+)
FNQYPNLVFDMPHSYGYRARTRGKFSKAFRRRGAVRISKSLTNYRIGDYVDIVVDGSIHKGMPHNLYHGRTGRVFNVNPRSVGVVVNKQFRNRIIPKRIHVRIEHLRQSTSRLGFLQRVRENDAKKTAANKEGKRISTKRQPVAPREAHVVKGEVK

Click here to download the sequence:
Link to NCBI Protein BLAST