Transcript Information: R_Transcript_37831.p1


Annotated TAIR IDAT5G60920.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COB
Annotation TypeOrtholog
Chromosome Positionchr5:24511466-24513932 | Reverse length=456
E-Value6.4E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1108.79825066993
Replicate 290.998488733707
Replicate 397.757591774451
Condition 2: 8 Hour
Replicate 191.085385581765
Replicate 2117.23225811759
Replicate 3151.76554107917
Condition 3: 24 Hour
Replicate 1117.64685446562
Replicate 2123.54605602605
Replicate 3118.88383997987


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37831.p1 GENE.R_Transcript_37831~~R_Transcript_37831.p1 ORF type:complete len:482 (+),score=54.47,COBRA|PF04833.11|4.7e-74,COBRA|PF04833.11|1e+04 R_Transcript_37831:83-1447(+)
ATGGAGTCTTTCACTAAGAGATCCATTCCTAAGCTTAGCACCTTCACCATTTTCTTTACCTTCTTCCTTTCTTGCACTTTCTTCACTTCTACAGATGCCTATGATGCACTTGATCCAAATGGAAACATTACTATTAAATGGGATATTATTAATTGGACACCTGATGGATATGTTGCTGTTGTCACCATGTTTAACTTCCAGCAATATCGTCACATTCAAGCGCCTGGATGGACGCTAGGATGGACATGGGCGAAAAAGGAGGTCATATGGACCATGGTGGGAGGCCAAACGACAGAACAAGGAGATTGTTCTAAATTCAAAGGGAACATTCCTCACTGTTGTAAAAAGGATCCGACCGTGGTTGATTTGCTGCCTGGAACTCCTTACAACCAGCAAATTGCTAATTGTTGTCGGGGTGGGGTGTTGAATTCTTGGGTCCAGGATCCGGCTAATGCTGTTAGTGCCTTCCAAGTGAGTGTGGGTCAAGCAGGAACAACTAACAAGACAGTGAAACTGCCGAGGAATTTCACATTGAAAGCACCCGGGCCTGGATACACTTGTGGTCCTGCAAAGATCGTTAAGCCAACACAGTTTACTACAGCTGATAAACGGAGAACTACTCAAGCTTTGATGACTTGGAATGTTACTTGCACATATTCTCAATTTTTGTCCCAGAAGACTCCTACGTGTTGTGTTTCCCTCTCCTCATTTTACAATGACACAATAGTACCCTGTCCAACTTGCTCTTGTGGATGCCAGAACAATATAACCCAACCAGGAAGCTGTGTCGAAGCGGACAACCCTTATTTAGCTTCAGCTGTTACAGCAAGCACGTTAAAATCTAGTAGTACGCCGCTGGTGCAGTGTACCACTCACATGTGTCCAGTTCGAATTCATTGGCATGTCAAGGTCAACTATAAGGACTACTGGCGTGTGAAGGTCACAATTACAAACTTCAACTACAAAATGAACTACACACAATGGAATCTGGTCGTGCAACATCCTAACTTCGACAACCTCACTCAAACATTCAGTTTCAATTACAAAGGATTGACCCCGTATGAAAATTTGAATGATACTGCTATGCTATGGGGAATTAAGTTCTATAACGATCTACTTATGGAAGCTGGTCCTCTCGGAAATGTCCAGTCAGAGTTGCTATTTCAGAAGGACAAATCATCATTCACTTTCGAGAAAGGATGGGCTTTTCCACGCCGGATATACTTTAATGGCGATAACTGTGTAATGCCTCCTCCAAATGCTTACCCATGGCTGCCAAATGCCAGTTCGAGGCCAGTCTTGTCTCTCCTGTGTTCATTTATAAGTATACTTGTGGCCTTGGCTTTCCTATTGGCATATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37831.p1 GENE.R_Transcript_37831~~R_Transcript_37831.p1 ORF type:complete len:482 (+),score=54.47,COBRA|PF04833.11|4.7e-74,COBRA|PF04833.11|1e+04 R_Transcript_37831:83-1447(+)
MESFTKRSIPKLSTFTIFFTFFLSCTFFTSTDAYDALDPNGNITIKWDIINWTPDGYVAVVTMFNFQQYRHIQAPGWTLGWTWAKKEVIWTMVGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVLNSWVQDPANAVSAFQVSVGQAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTQFTTADKRRTTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNDTIVPCPTCSCGCQNNITQPGSCVEADNPYLASAVTASTLKSSSTPLVQCTTHMCPVRIHWHVKVNYKDYWRVKVTITNFNYKMNYTQWNLVVQHPNFDNLTQTFSFNYKGLTPYENLNDTAMLWGIKFYNDLLMEAGPLGNVQSELLFQKDKSSFTFEKGWAFPRRIYFNGDNCVMPPPNAYPWLPNASSRPVLSLLCSFISILVALAFLLAYA*

Click here to download the sequence:
Link to NCBI Protein BLAST