Transcript Information: R_Transcript_37854.p1


Annotated TAIR IDAT3G18730.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)TSK, MGO3, BRU1
Annotation TypeOrtholog
Chromosome Positionchr3:6446062-6453045 | Reverse length=1311
E-Value5.2E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4690916755176
Replicate 20.57872933892773
Replicate 30.85868696611817
Condition 2: 8 Hour
Replicate 10.91788247872804
Replicate 20.4684197960116
Replicate 31.6210368911261
Condition 3: 24 Hour
Replicate 11.9490089928701
Replicate 21.2644690874421
Replicate 32.051218190062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37854.p1 GENE.R_Transcript_37854~~R_Transcript_37854.p1 ORF type:complete len:907 (+),score=212.80,TPR_12|PF13424.2|0.55,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|2.3,TPR_12|PF13424.2|6.9,TPR_12|PF13424.2|1.3e-11,TPR_12|PF13424.2|1.9e-05,TPR_1|PF00515.24|16,TPR_1|PF00515.24|98,TPR_1|PF00515.24|17,TPR_1|PF00515.24|1.2,TPR_1|PF00515.24|1.1e-05,TPR_1|PF00515.24|0.37,TPR_1|PF00515.24|1.1e+03,TPR_2|PF07719.13|13,TPR_2|PF07719.13|73,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|13,TPR_2|PF07719.13|0.12,TPR_2|PF07719.13|0.0002,TPR_2|PF07719.13|0.047,TPR_2|PF07719.13|3.1e+03,TPR_8|PF13181.2|90,TPR_8|PF13181.2|30,TPR_8|PF13181.2|4.2e+03,TPR_8|PF13181.2|36,TPR_8|PF13181.2|10,TPR_8|PF13181.2|7e-06,TPR_8|PF13181.2|4.7,TPR_8|PF13181.2|4.8e+03,TPR_11|PF13414.2|7.5,TPR_11|PF13414.2|1.3e+02,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|0.00095,TPR_11|PF13414.2|8.1,TPR_11|PF13414.2|9.7,TPR_7|PF13176.2|1.5e+02,TPR_7|PF13176.2|16,TPR_7|PF13176.2|1.6e+04,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|14,TPR_7|PF13176.2|0.00012,TPR_7|PF13176.2|12,TPR_7|PF13176.2|2.5e+02,TPR_10|PF13374.2|2.1e+02,TPR_10|PF13374.2|1.5,TPR_10|PF13374.2|1.1e+02,TPR_10|PF13374.2|0.18,TPR_10|PF13374.2|27 R_Transcript_37854:135-2723(+)
ATGGCGAGAGACGAAACGGAGCTATCAGCAGCGAAAAACGCGTACCGAAACGCGAGGGAGGTGGGGAATCGGAGAGAAGAAGCGAGATGGGCGAATGTGATTGGTGATATCTTCAAGAAACGAGGTGAATACGTTGAAGCTCTCAAATGGCTAAGGCTCGATTACGACATTTCCTCAAAGTATTTGCACGGCAAGGATCTTCTTCCTACTTGTCAGTCGATCGGTGAGCTTTGTTTACGCCTTGAGCAGTTCGATGACGCCCTCATTTACCAGAAGGAGCATTTACGGCTGGCAAAAGAAGCAAAGGACTTGGTTGAGCAGCAAAGAGCAACCACACAACTAGGACGGACCTATCATGAAATGTTTGCAAGATCGGATAATAACCATGCTGCTCTTCATAATGCAAAAAGGTACTTTGATTCTGCTATGAGCCTTGCTCGTTCTCTCAAGGAGAATCCCCCAAATTCTAAATCCTCGTTCCTGAAGGAATATATCGATGCTCATAATAATGTCGGGATGCTTGAAATGGACCTTGATAACTTGGAAGAAGCTGAAAGAATCCTAACCGGAGGGTTGGAGATATGCGACGAGGAGGAGGTAAATGATGATGATGATGCACGAAGTAGGTTGCATCATAACCTTGGATTTGTATATACACGGCTAAGAATGTGGGATAAGGCTCGAGAGCATATCAAGACGGATATTTTGATTTGTAAGAACATTGGTCATCTCCAAGGGGAGGCTAAAGGTTATAATAATCTTGGGGAACTATATGTTCAATTTCAGAAGTTTCAAGAAGCCAAGTCTAGCTACAAAAAGGCACTTGAACTGGCAAAATCAATGGAAGATGAGCATGCTTTGGCAAATCAAATTCAGGAAAATATTAAAGTTGTTAAGGAATATGTTAAAGTGATGGAGGAAATGAAATTGGAAGAGCAGAATCTCAAGAAGTTAAAACGTACTATGGCTGCAGCTAAAGGCACTTCGGGAGAAAGGAAGTGTTTGAGGCAGCAGATGGCATGTCTTGATCATCTCATTGACAAAGCGATTGTGGTTTCTGCTTGGTCAAAGCATCGGGAGTTTGCGAAGATGAAAAAGAGAATTGCAAGCAAACTCTGTGACAAAGAAAAGTTGGGTGATGCTTTTTTGGCTGTTGGAGAATCATACCAAAAGCTTAGGAATTTTCAGAAAGCTCGTAAATGGTATAACAAAAGTTGGGACATCTATAAACTGATCCATAATCTGGAGGGCCAAGCAATAGTAAAGATTAATATGGGTGATATTTTGGACTCAGAAGGTGATCGAATGGGTGCATTAAAAACATTTGAAGAAGGATACAGAATTGCAGTTGAAGCCAACAAAATTCCTATACAGATTTCAGCACTGGAGAATATGCATTACTGTCACATGATGAGATTTGATAATGGTGAAGAAGCTAGGAGGTTGGAGCTTCAAATTGGCAACTTGAAGGCTTTAGTAAGCAGTGAGCAGGAAGCTCACGGTGCTTTAGGGGATAGTTGCTCTGAAACTGATACTGAAGGAAATGATAGTTTTGGCCGTAAGTCCACTGCCTCTGGATCATCGCGGAGCATTGAATCCCTTCCTATGGGTAAACCTGTTTCTGGTATTGAAGAAATTGAGGATGATGAAGCTTTGGGGTCACTTTCTCTTTCCTGTAAAAAACTGCGAAAACAAGAAACAGAATGTGAACGAAGAGTTAAAAGATGTTCAAGGACTGCTGATGCTTCACCAAAAAGCTTATGGAAATCAGTGGAAAGTCCTTCTACAGCTGTCGGCCGGAAACGTGCTCGTCTAGTGCTTTCTGATGATGAAGATGATGCCGAGTGTGCAAGCAGAATGCATAATGATCCAGTAGAGGATGTTGCTACTTCAAATGAAGCCAAAGTGAGGGACAATCTTCCTGACACAGCGGGTGACTTAATGGATCTCAAGTCACATGGTTCGAAACATGATATTAGTTCTTGCAATCCTGTTAGTCTTGAAGAAACCTCATCTTCCTTCAAATCTAGCACTCCAATAGAAGCTGTTGTCGGGTATCTCAAGTCTCCTGGCGATAATGAGCACTGCATAAAAATTAAAGTCAAAGGTGTTCTTGTATGTATTGAAGCAGAGCTGTGTATGTTTGCTGATGAACTTGACTTGGAGGCCTTGAAGGCTCAAGCAGCCTGCTCATACTATTTGCAGCTATCTTCACCAAAGAAGTCCAGTGGCCTGCTGCCTATCATTGGACATTTGACATTAAGGGGACAGGCTGTAGCATCAGCTGATGTGGATAATATTGTGATTGATGCCCAAGCTGGAGGTTTGATAGAAGCATCGATTAATGGATGGATACAGAAGCGACTGATAAAAATGTACATTGACTGCTGTCAGAAGTTGATGGAGACACCCAATATGAAGTTGCTAATGAAATTGTACAATTTGGAGGTCTCTGAGGATGAAGTCATTGTATCTGATTGTGAGCTGCAAGATATGTCAGTTGTTCCTTTATTGGAAGCCCTGCATGCCCACAAAACTATTGCTATGTTGGATCTTTCCCACAACATGTTGGGAAATGCCACAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37854.p1 GENE.R_Transcript_37854~~R_Transcript_37854.p1 ORF type:complete len:907 (+),score=212.80,TPR_12|PF13424.2|0.55,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|2.3,TPR_12|PF13424.2|6.9,TPR_12|PF13424.2|1.3e-11,TPR_12|PF13424.2|1.9e-05,TPR_1|PF00515.24|16,TPR_1|PF00515.24|98,TPR_1|PF00515.24|17,TPR_1|PF00515.24|1.2,TPR_1|PF00515.24|1.1e-05,TPR_1|PF00515.24|0.37,TPR_1|PF00515.24|1.1e+03,TPR_2|PF07719.13|13,TPR_2|PF07719.13|73,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|13,TPR_2|PF07719.13|0.12,TPR_2|PF07719.13|0.0002,TPR_2|PF07719.13|0.047,TPR_2|PF07719.13|3.1e+03,TPR_8|PF13181.2|90,TPR_8|PF13181.2|30,TPR_8|PF13181.2|4.2e+03,TPR_8|PF13181.2|36,TPR_8|PF13181.2|10,TPR_8|PF13181.2|7e-06,TPR_8|PF13181.2|4.7,TPR_8|PF13181.2|4.8e+03,TPR_11|PF13414.2|7.5,TPR_11|PF13414.2|1.3e+02,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|0.00095,TPR_11|PF13414.2|8.1,TPR_11|PF13414.2|9.7,TPR_7|PF13176.2|1.5e+02,TPR_7|PF13176.2|16,TPR_7|PF13176.2|1.6e+04,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|14,TPR_7|PF13176.2|0.00012,TPR_7|PF13176.2|12,TPR_7|PF13176.2|2.5e+02,TPR_10|PF13374.2|2.1e+02,TPR_10|PF13374.2|1.5,TPR_10|PF13374.2|1.1e+02,TPR_10|PF13374.2|0.18,TPR_10|PF13374.2|27 R_Transcript_37854:135-2723(+)
MARDETELSAAKNAYRNAREVGNRREEARWANVIGDIFKKRGEYVEALKWLRLDYDISSKYLHGKDLLPTCQSIGELCLRLEQFDDALIYQKEHLRLAKEAKDLVEQQRATTQLGRTYHEMFARSDNNHAALHNAKRYFDSAMSLARSLKENPPNSKSSFLKEYIDAHNNVGMLEMDLDNLEEAERILTGGLEICDEEEVNDDDDARSRLHHNLGFVYTRLRMWDKAREHIKTDILICKNIGHLQGEAKGYNNLGELYVQFQKFQEAKSSYKKALELAKSMEDEHALANQIQENIKVVKEYVKVMEEMKLEEQNLKKLKRTMAAAKGTSGERKCLRQQMACLDHLIDKAIVVSAWSKHREFAKMKKRIASKLCDKEKLGDAFLAVGESYQKLRNFQKARKWYNKSWDIYKLIHNLEGQAIVKINMGDILDSEGDRMGALKTFEEGYRIAVEANKIPIQISALENMHYCHMMRFDNGEEARRLELQIGNLKALVSSEQEAHGALGDSCSETDTEGNDSFGRKSTASGSSRSIESLPMGKPVSGIEEIEDDEALGSLSLSCKKLRKQETECERRVKRCSRTADASPKSLWKSVESPSTAVGRKRARLVLSDDEDDAECASRMHNDPVEDVATSNEAKVRDNLPDTAGDLMDLKSHGSKHDISSCNPVSLEETSSSFKSSTPIEAVVGYLKSPGDNEHCIKIKVKGVLVCIEAELCMFADELDLEALKAQAACSYYLQLSSPKKSSGLLPIIGHLTLRGQAVASADVDNIVIDAQAGGLIEASINGWIQKRLIKMYIDCCQKLMETPNMKLLMKLYNLEVSEDEVIVSDCELQDMSVVPLLEALHAHKTIAMLDLSHNMLGNATM*

Click here to download the sequence:
Link to NCBI Protein BLAST